BAC Information

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BAC

Clone NameB6Ng01-350K21
Chromosome1 (Build37)
Map Location 108,901,348 - 108,902,406
singlet/doubletsinglet
Overlap genenone
Upstream geneZcchc2, EG435634, Phlpp, LOC626075, Bcl2, LOC100042085, Fvt1, Vps4b, Serpinb5, LOC671141, Serpinb12, Serpinb13
Downstream geneLOC666394, Serpinb3a, Serpinb3d, LOC100041276, Serpinb3b, EG666401, Serpinb3c, LOC666414, Serpinb11, Serpinb7, Serpinb2, Serpinb10, Serpinb8
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-350K21.bB6Ng01-350K21.g
ACCGA131280GA131281
length1,0531,175
definitionB6Ng01-350K21.b B6Ng01-350K21.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattcccagacccagtatccacctgaagtagacttctgtgcagagtggc
cacaatgaccatttgagagccttgctatgattatagcagctttaccagat
tagcaccagctggaagccacgtagtgtgtagcaagaagctctctgctttt
gccaaatagtatgctgccaaacaatgtgacttgggtttttcatcaccttt
cttacaactttcagagatgttgaacatccattgaacacacttggaaactc
aaataaggagagctcaaatataaaaatggatgtcgagtggaaaaaaaccc
ttatgtgtagctagctgttgggaaacattgattaacacccaagatggcaa
ctgtagctagcaacactcttattccatctgtttccttgtttgcctatccc
tattgcattttgagtcacattacttcttacagtctgattaatagtgacgg
tgaatcatcccttctctttcttctctgcctttttattaggctgagaagag
gtggccatatgaatgagagaagcagcagagctggttttgccttctcatcc
cctgccagaaaagatgtctggtagcaattgctcaggaccttatgtaagtg
gaacattcgttccttacagacttatatgcaaatcctccaacaggtagtac
ttaactgcatccaatagaataataaggttacatacaatgatcgagtgtgt
gctttatttaatacccaatgtacatgttcattaaaaaagaaaaagaaaag
aaagacgtgctttacaaaaacatcctgaaaatcgccatgaatcgggtatg
gaaaaggatgtaatagggaacatctagaaaagtaagctttagccggttgt
ggtggtgaacgccagtaggatttgctgaaggaggcagaggcaggaggatc
acaagttcgaggccagcctgggctacacatttttactcactgataagtgg
atattatcccagaacttagtatacctgagatataagatacatttgcaaaa
cacatgaaactgaagagacgagatcaaagtgtgacactttgccccttctt
aga
gaattctctgtttagctctgttccccatttttaaatagggttatttggtt
ctctggactctaacttcttgagtttttgtatatattgggtattagtcctc
tattggatgtaggattggtaaatatcttttcccagtctgttagttgccta
ttttcctgttggcagtgtcctttggcttacagaagttttgcaattttatt
aggtcccatttgtcgattcttgatcttagagcataagccactggtgttct
ggtcagaaactttcccctgtgcccatgtgttcgaggctcttccccacttt
ctcttctattcgattcagtgtgtctggttttatgtggaggtccttgatct
acttgaacttggactttgtacaggtaggtaagagtggatcaatttgcatt
cttctacatgttgaatcagcatcatttttgaaaatgttgtcttttttttc
ctccaggtggttttagctcctttgtcaaagatcaagtgaccataggtata
tgtgtggattcgtttctgggtctttaattatattccattgatctacctga
ctgtctctgtaccaataccatgcattttttttttaccactattgctctgt
aaatcagtttgaggtcagggatgctgatggcccaagaagttcttttattg
ttgagaatacttttcgctgtcctgggttgtttgttattccaaatgagttt
gagaattgctctttctaactctatgaagaattgagttgtaagtctgatgg
ggatttcattgaacctgtagattcctttcttcatgatggccatttttatt
atattaatcctgccaattcaccagcataagtgatctttccatcttctgag
gtcttagatttttttctttagagacttgaagttcttgttgtagacatctt
tcacttgtttggttagagttacaccaaaatattttatattgtttgtgact
tttgtgaagagtgtcattttccctattttctctcagcccgttatctttgc
gtatagaagctactgatttgtttaggttgattttaatattccagccactt
gctgaagtgcttatcagtttagggaattctctggtgcagtttgggtacct
ttaggtattctaccattcaatctgccaataggcaattgagtccgtctttc
ctcggaatggaaatttctctctgtg
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_108901348_108902406
seq2: B6Ng01-350K21.b_47_1099 (reverse)

seq1  TCTAAGAAGGGGCAAAGTGTCCACACTTTGGTCTTCGTTCTTCTTCAGTT  50
      |||||||||||||||||||| ||||||||| || ||||   |||||||||
seq2  TCTAAGAAGGGGCAAAGTGT-CACACTTTGATC-TCGT--CTCTTCAGTT  46

seq1  TCATGTGTTTTGCAAATTGTATCTTATATCTCAGGTATACTAAGTTTCTG  100
      |||||||||||||||| ||||||||||||||||||||||||||| |||||
seq2  TCATGTGTTTTGCAAA-TGTATCTTATATCTCAGGTATACTAAG-TTCTG  94

seq1  GGATAATATCCACTTATCAGTGAGTAAAAATGTGTAGCCCAGGCTGGCCT  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGATAATATCCACTTATCAGTGAGTAAAAATGTGTAGCCCAGGCTGGCCT  144

seq1  CGAACTTGTGATCCTCCTGCCTCTGCCTCCTTCAGCAAATCCTACTGGCG  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAACTTGTGATCCTCCTGCCTCTGCCTCCTTCAGCAAATCCTACTGGCG  194

seq1  TTCACCACCACAACCGGCTAAAGCTTACTTTTCTAGATGTTCCCTATTAC  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TTCACCACCACAACCGGCTAAAGCTTACTTTTCTAGATGTTCCCTATTAC  244

seq1  ATCCTTTTCCATACCCGATTCATGGCGATTTTCAGGATGTTTTTGTAAAG  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATCCTTTTCCATACCCGATTCATGGCGATTTTCAGGATGTTTTTGTAAAG  294

seq1  CACGTCTTTCTTTTCTTTTTCTTTTTTAATGAACATGTACATTGGGTATT  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CACGTCTTTCTTTTCTTTTTCTTTTTTAATGAACATGTACATTGGGTATT  344

seq1  AAATAAAGCACACACTCGATCATTGTATGTAACCTTATTATTCTATTGGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAATAAAGCACACACTCGATCATTGTATGTAACCTTATTATTCTATTGGA  394

seq1  TGCAGTTAAGTACTACCTGTTGGAGGATTTGCATATAAGTCTGTAAGGAA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TGCAGTTAAGTACTACCTGTTGGAGGATTTGCATATAAGTCTGTAAGGAA  444

seq1  CGAATGTTCCACTTACATAAGGTCCTGAGCAATTGCTACCAGACATCTTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CGAATGTTCCACTTACATAAGGTCCTGAGCAATTGCTACCAGACATCTTT  494

seq1  TCTGGCAGGGGATGAGAAGGCAAAACCAGCTCTGCTGCTTCTCTCATTCA  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTGGCAGGGGATGAGAAGGCAAAACCAGCTCTGCTGCTTCTCTCATTCA  544

seq1  TATGGCCACCTCTTCTCAGCCTAATAAAAAGGCAGAGAAGAAAGAGAAGG  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TATGGCCACCTCTTCTCAGCCTAATAAAAAGGCAGAGAAGAAAGAGAAGG  594

seq1  GATGATTCACCGTCACTATTAATCAGACTGTAAGAAGTAATGTGACTCAA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GATGATTCACCGTCACTATTAATCAGACTGTAAGAAGTAATGTGACTCAA  644

seq1  AATGCAATAGGGATAGGCAAACAAGGAAACAGATGGAATAAGAGTGTTGC  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AATGCAATAGGGATAGGCAAACAAGGAAACAGATGGAATAAGAGTGTTGC  694

seq1  TAGCTACAGTTGCCATCTTGGGTGTTAATCAATGTTTCCCAACAGCTAGC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TAGCTACAGTTGCCATCTTGGGTGTTAATCAATGTTTCCCAACAGCTAGC  744

seq1  TACACATAAGGGTTTTTTTCCACTCGACATCCATTTTTATATTTGAGCTC  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TACACATAAGGGTTTTTTTCCACTCGACATCCATTTTTATATTTGAGCTC  794

seq1  TCCTTATTTGAGTTTCCAAGTGTGTTCAATGGATGTTCAACATCTCTGAA  850
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCCTTATTTGAGTTTCCAAGTGTGTTCAATGGATGTTCAACATCTCTGAA  844

seq1  AGTTGTAAGAAAGGTGATGAAAAACCCAAGTCACATTGTTTGGCAGCATA  900
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGTTGTAAGAAAGGTGATGAAAAACCCAAGTCACATTGTTTGGCAGCATA  894

seq1  CTATTTGGCAAAAGCAGAGAGCTTCTTGCTACACACTACGTGGCTTCCAG  950
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTATTTGGCAAAAGCAGAGAGCTTCTTGCTACACACTACGTGGCTTCCAG  944

seq1  CTGGTGCTAATCTGGTAAAGCTGCTATAATCATAGCAAGGCTCTCAAATG  1000
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CTGGTGCTAATCTGGTAAAGCTGCTATAATCATAGCAAGGCTCTCAAATG  994

seq1  GTCATTGTGGCCACTCTGCACAGAAGTCTACTTCAGGTGGATACTGGGTC  1050
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTCATTGTGGCCACTCTGCACAGAAGTCTACTTCAGGTGGATACTGGGTC  1044

seq1  TGGGAATTC  1059
      |||||||||
seq2  TGGGAATTC  1053