BAC Information

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BAC

Clone NameB6Ng01-350P14
Chromosome1 (Build37)
Map Location 45,144,091 - 45,146,743
singlet/doubletsinglet
Overlap genenone
Upstream gene1700029F09Rik, Kdelc1, Bivm, Ercc5, 4832428D23Rik, LOC435619, Txn-ps1, Gulp1, LOC100041738, LOC100041752
Downstream geneLOC383640, Col3a1, Col5a2, EG666799, LOC631429, LOC666814, EG666819, Wdr75, EG433297, LOC383644, Slc40a1, LOC670603, EG227054, LOC100042453, EG212225, Dnahc7b
LinkOpen Mouse BAC browser



BAC End Information

BAC end BAC-end 1BAC-end 2
end nameB6Ng01-350P14.bB6Ng01-350P14.g
ACCGA131488GA131489
length9981,193
definitionB6Ng01-350P14.b B6Ng01-350P14.g
singlet/doubletsinglet---
BLAST hituniqueno hit data
sequence
gaattccaagttcagggtcggtttcatggactatctagaacattggaaca
ctggcaaaggcttagctatatgtcaaaatcaatccttaaaggcacttata
ataaaacaatactgaaagaaagcacacagatgcatacaccagactaacat
ggggacaggctttgagtgtacctgctatgggaatgcccaggttccaatat
gctaagtttccatgaaactttttgcctctggactgcttccaggtttctaa
acctctcaagcagacttcattggaatggatgtggcagtaaagaaataaaa
taacaagaaaaaagaaagaaagaaagaaagaaagaaagaaagaaagaaag
aaagaaagaaagaaagaaagaaaagaaaagaaaagaaaagaaaagaaaag
aaaagaaaagaaaagaaaaaaaaagaaaatctgacaaagagcttcaagaa
ggacagtagaattcaactgtaaatcaatactataaaatgaccaggaacct
gaaagaaaattaaattcaagatctgtgactcatgcggcttgctaattaga
agggctttttgggcctagggcaaagaactaaggctgttgctcttaagtca
ttccaggaactggctagccataaagatagaagagacctacaaggacatcc
ggactatctcaggaaggacatccggactacctcagatgcatcataagcac
ctgctcttcagaattgctgttaccttgctctgcacgtacaatttgctgat
gtttaaactgtcaaattgtgtgtaacctcgccaattcttcccctgtgccc
aacctttttgtatataaacccctagtttctgagcctcatggttgacccct
ctgtctcctgtgtgagatatgtgttggcccaatgggagagttaggggaag
aactaaggacctgaaggggtttgcaacctcatcagagaaaaatgagttaa
accacagacaccctcataccccacccccatccctgccagagatcataa
gaattccatttatcaatttttgaatatttaaaaaatgtttctcatccaat
tgtgttttatcttttgaaaattctctatttagatatgtacctactttaaa
tggagttatttgttttaatagaacattttgatttccaatattctttatat
attttagatattagccctcaatctaatatgtagttgggaaatattgtttc
ttattctgcaacctgctgctttgtctatttgatagtgtcctttggaatag
agaaccttttcagtttcttgaggtctcatttcttagttgttgatcttagt
ccttacactaacagtgttctgttacaaaagtcttttcctatgccaatgag
ttcaaggtttttcccctacttctcttctctcaggttcattgtggctggtt
ttatgttgaggtctttgaaccatttggagttaagttttgtacagtttgag
aaatatgggtctatttgtactcttctacatacagccatccagcttggcaa
acatcatttgttaaagatactgtctttttccagtgaatatttctggtttc
tttatcaaaattcaggtatctatgtgtgtggatttatgtctaggtgttca
attttgttccatggagcactgtgcttatttttatttcaatactgtggtgt
tttgaatatgcttgtcacagggagtggcactattaggagttatgggcttg
ttggaggaagtgtgtcactgtagaggtagactttgagaccctctttctag
ctgcctgaggacagctccctgtcttcctttccatgaatatgtagaactct
tagctcctttataccatgccagcctggaagctgctgtgctccctaacatg
atgataatcaactgaacctatgaacctgtatgccagccacaattaaatgc
tgtcctttataagagttgccttggtcatgatgttttgtcacagaagtaaa
acccaaactaagaccaataccatgctaattttgttactacagctatgtag
tacattgaaagcagagagatgatacctccagaaaattctttacattcaga
tgttcatgtattctgtgtttattctgatcataggtgattttcttgagact
gtgaagaatcagaacactatcattcatctcaatactggttacaggctagc
tgtagttggttatatagccgtaaaggaggcagaacaacctcga
quality valuesOpen.Open.




Alignment Information

BAC End 1BAC End 2
seq1: chr1_45144091_45146743
seq2: B6Ng01-350P14.b_93_933

seq1  CATTGGAACACTGGCAAAGGCTTAGCTATATGTCAAAATCAATCCTTAAA  50
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CATTGGAACACTGGCAAAGGCTTAGCTATATGTCAAAATCAATCCTTAAA  50

seq1  GGCACTTATAATAAAACAATACTGAAAGAAAGCACACAGATGCATACACC  100
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GGCACTTATAATAAAACAATACTGAAAGAAAGCACACAGATGCATACACC  100

seq1  AGACTAACATGGGGACAGGCTTTGAGTGTACCTGCTATGGGAATGCCCAG  150
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGACTAACATGGGGACAGGCTTTGAGTGTACCTGCTATGGGAATGCCCAG  150

seq1  GTTCCAATATGCTAAGTTTCCATGAAACTTTTTGCCTCTGGACTGCTTCC  200
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GTTCCAATATGCTAAGTTTCCATGAAACTTTTTGCCTCTGGACTGCTTCC  200

seq1  AGGTTTCTAAACCTCTCAAGCAGACTTCATTGGAATGGATGTGGCAGTAA  250
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGGTTTCTAAACCTCTCAAGCAGACTTCATTGGAATGGATGTGGCAGTAA  250

seq1  AGAAATAAAATAACAAGAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA  300
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAATAAAATAACAAGAAAAAAGAAAGAAAGAAAGAAAGAAAGAAAGAA  300

seq1  AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAG  350
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AGAAAGAAAGAAAGAAAGAAAGAAAGAAAGAAAAGAAAAGAAAAGAAAAG  350

seq1  AAAAGAAAAGAAAAGAAAAGAAAAGAAAAAAAAAGAAAATCTGACAAAGA  400
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAAAGAAAAGAAAAGAAAAGAAAAGAAAAAAAAAGAAAATCTGACAAAGA  400

seq1  GCTTCAAGAAGGACAGTAGAATTCAACTGTAAATCAATACTATAAAATGA  450
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTTCAAGAAGGACAGTAGAATTCAACTGTAAATCAATACTATAAAATGA  450

seq1  CCAGGAACCTGAAAGAAAATTAAATTCAAGATCTGTGACTCATGCGGCTT  500
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCAGGAACCTGAAAGAAAATTAAATTCAAGATCTGTGACTCATGCGGCTT  500

seq1  GCTAATTAGAAGGGCTTTTTGGGCCTAGGGCAAAGAACTAAGGCTGTTGC  550
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  GCTAATTAGAAGGGCTTTTTGGGCCTAGGGCAAAGAACTAAGGCTGTTGC  550

seq1  TCTTAAGTCATTCCAGGAACTGGCTAGCCATAAAGATAGAAGAGACCTAC  600
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCTTAAGTCATTCCAGGAACTGGCTAGCCATAAAGATAGAAGAGACCTAC  600

seq1  AAGGACATCCGGACTATCTCAGGAAGGACATCCGGACTACCTCAGATGCA  650
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  AAGGACATCCGGACTATCTCAGGAAGGACATCCGGACTACCTCAGATGCA  650

seq1  TCATAAGCACCTGCTCTTCAGAATTGCTGTTACCTTGCTCTGCACGTACA  700
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  TCATAAGCACCTGCTCTTCAGAATTGCTGTTACCTTGCTCTGCACGTACA  700

seq1  ATTTGCTGATGTTTAAACTGTCAAATTGTGTGTAACCTCGCCAATTCTTC  750
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  ATTTGCTGATGTTTAAACTGTCAAATTGTGTGTAACCTCGCCAATTCTTC  750

seq1  CCCTGTGCCCAACCTTTTTGTATATAAACCCCTAGTTTCTGAGCCTCATG  800
      ||||||||||||||||||||||||||||||||||||||||||||||||||
seq2  CCCTGTGCCCAACCTTTTTGTATATAAACCCCTAGTTTCTGAGCCTCATG  800

seq1  GTTGACCCCTCTGTCTCCTGTGTGAGATATGTGTTGGCCCAATGGGAGAG  850
      |||||||||||||||||||||||||||||||||||||||||         
seq2  GTTGACCCCTCTGTCTCCTGTGTGAGATATGTGTTGGCCCA---------  841

seq1  TTAGGGGAAGAACTAAAGGACCTGAAGGGGTTTGCAACCTCATCAGAAGA  900
                                                        
seq2  --------------------------------------------------  841

seq1  AAAATGAGTTAAACCAACAAGACACCCCTCATACCCCACCCCCATCCCTG  950
                                                        
seq2  --------------------------------------------------  841

seq1  CCCAGAGATCATAAAAACTGAACCACCATGGAAAGGACTAAACCACACAT  1000
                                                        
seq2  --------------------------------------------------  841

seq1  GGAAGGAACCATGCTACAGCTGCATATATAGGAGAGGATGGCCTCACCTG  1050
                                                        
seq2  --------------------------------------------------  841

seq1  GCATCAGTGGGAGGGGAACCCCTGCTAGAGCAGAGAGAAGGGAGTGGGTA  1100
                                                        
seq2  --------------------------------------------------  841

seq1  GGTGGGTAGAGGAGCACCCTCATAGAATCAGGGGGTGGGGGGATGGGATA  1150
                                                        
seq2  --------------------------------------------------  841

seq1  AAGGTTTTGAGGAAGGGAAACCAGCAATGGGGGATAATATTTGAAATGTA  1200
                                                        
seq2  --------------------------------------------------  841

seq1  AGCTGCTGAAGACAAGCCTCAGTTGGGTCTCTGATCTGCAGTAAATGGGG  1250
                                                        
seq2  --------------------------------------------------  841

seq1  TTCTGGTTATAGGTGAGCAAGGATTTAGTGAGAAATTAATGACCAACAAA  1300
                                                        
seq2  --------------------------------------------------  841

seq1  TATGAAAACAAGGTAGTGCCGTATCTGGATGTATTTTGTCAAACTGAGCA  1350
                                                        
seq2  --------------------------------------------------  841

seq1  GAAGCCTTATAATACAAATGAAAAACAAGAAGGCTAGGCGAATACATTTG  1400
                                                        
seq2  --------------------------------------------------  841

seq1  CCAAGGTACATTGGTTCTTACACAAAACAAAGAAAATGCATACATAAAAA  1450
                                                        
seq2  --------------------------------------------------  841

seq1  ATGTCAGAAGCCAGGCCATGTTTACAACTGAGAATAGGAACAACCCTTAA  1500
                                                        
seq2  --------------------------------------------------  841

seq1  TTAAGATCACCTAAACACAGGAGCCAGGCGATGCTAGTCTACTGTTAAAC  1550
                                                        
seq2  --------------------------------------------------  841

seq1  CCACCATCAGGGGTCCTATAAAAAATAACTGATTATGCTATTCCTCTGAG  1600
                                                        
seq2  --------------------------------------------------  841

seq1  CCTAGGGAAAATCCTGCACCAGGGGTTCTACTAACCCTTTCATAAATAAT  1650
                                                        
seq2  --------------------------------------------------  841

seq1  ACTACAACCCACCTATTTTCTAGGCCATAGTGTATTTCTGTGTTTGGATG  1700
                                                        
seq2  --------------------------------------------------  841

seq1  TGACTCCGCTATTGTCCTAAGTAATTACTTTGTAGACTAGCCCTGAGCTT  1750
                                                        
seq2  --------------------------------------------------  841

seq1  TTCTAGGTCTCTTCAAGTAAATTGTAATGTGTAATTAGTTTCACTGTCTC  1800
                                                        
seq2  --------------------------------------------------  841

seq1  TAATAGAAGTGAATTTGAATGTTACTGAACAGGTAACATTCTTACTGAAT  1850
                                                        
seq2  --------------------------------------------------  841

seq1  TCTTAGTTCAGGGTCAGTTTCAAGGAGTATCTAGAATATTGGAACACTGG  1900
                                                        
seq2  --------------------------------------------------  841

seq1  CAAAGGCTTAGCTATATGTCAAAATCAATCCTTAAAGGCACTTATAATAA  1950
                                                        
seq2  --------------------------------------------------  841

seq1  AACAATACTGAAAGAGAGCATAGGAATCCATACACCAGACTAACATGGGA  2000
                                                        
seq2  --------------------------------------------------  841

seq1  ACAGGTTTTGAGGGTACTTGCTATGGGAATGCCAAGGTTCCAGTAGGCTA  2050
                                                        
seq2  --------------------------------------------------  841

seq1  AGTTTCCATGAAACTCTTTGCCTCTGGCCTGCTTCCAGATTTCTAAACCT  2100
                                                        
seq2  --------------------------------------------------  841

seq1  GTCAAGCAGACTTTACTGGAGTGGATGTAGCAGTAAATAAATAAAATAAC  2150
                                                        
seq2  --------------------------------------------------  841

seq1  CAAAAAAAAAAAAAAGGAAAAAAAAAGAAAAGAAAAGAAAAAAAAGAAAA  2200
                                                        
seq2  --------------------------------------------------  841

seq1  TCTGACAAAGAGCTTCAAGAAGGACAGTAGAATTCAACTGTAAATCAATA  2250
                                                        
seq2  --------------------------------------------------  841

seq1  CCATAAAGATGAGCAGGAACCTGAAAGAAAATTAAATTCAAGATCTGTGA  2300
                                                        
seq2  --------------------------------------------------  841

seq1  CTCATGCGGCTTGCTAGTTAGAAGGGCTTTTTGGACCTAGGGCAAAGAAC  2350
                                                        
seq2  --------------------------------------------------  841

seq1  TAAGGCTGTTGCTCTTAAGTCATTCCAGGAACTGTCTAGCCATATAGATA  2400
                                                        
seq2  --------------------------------------------------  841

seq1  GGAGAGACCTACAAGGACATCCAGACTATCTCAGGAAGGATGTCTGGACT  2450
                                                        
seq2  --------------------------------------------------  841

seq1  ATCTCAGCTGAGTCATAAACACCTGCCCTTTAGTATTGCTGTTTCCTTGC  2500
                                                        
seq2  --------------------------------------------------  841

seq1  TCTGTATGTACAATTTACTGATGTTTAAACTCTCCTGTTGTGTGTAACCA  2550
                                                        
seq2  --------------------------------------------------  841

seq1  TGCCAATTCTTCCCCTGCACCCAACTTTTTTGTATATAAACCCCTAGGTT  2600
                                                        
seq2  --------------------------------------------------  841

seq1  CTGAGCCTCGTGGTTGACCCCTCTGTCTCCTCTGTGAGATATGTGTTGGC  2650
                                                        
seq2  --------------------------------------------------  841

seq1  CCA  2653
         
seq2  ---  841