Query= MSMg01no046_a04.b1 MSMg01no046_a04.b1 CHROMAT_FILE:
MSMg01no046_a04.b1 PHD_FILE: MSMg01no046_a04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:06:06 2005
(581 letters)
>mm_chr1_61760813_61761793
Length = 981
Score = 808 bits (418), Expect = 0.0
Identities = 430/434 (99%)
Strand = Plus / Minus
Query: 148 gaagaagaagaagaaataattaaatatcaaacttccccaagaaacttgatgcccttaact 207
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 981 gaagaagaagaagaaataattaaatatcaaacttccccaagaaacttgatgcccttaact 922
Query: 208 agcaggaagtagtctaacaataacatcatctcctttcccctctattctttctttttcctc 267
|||||||||||||||||||||||||||| || ||||||||||||||||||||||||||||
Sbjct: 921 agcaggaagtagtctaacaataacatcaccttctttcccctctattctttctttttcctc 862
Query: 268 tcctatctagtattaagggttgaaagagtgaaaagagtagaataaagaaggactcacaaa 327
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 861 tcctatctagtattaagggttgaaagggtgaaaagagtagaataaagaaggactcacaaa 802
Query: 328 gtagccaaagtccagttacatagtgtatcatcaaaacaggaaaagactgtaaatacactg 387
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 gtagccaaagtccagttacatagtgtatcatcaaaacaggaaaagactgtaaatacactg 742
Query: 388 ccatgctgactgcagtgcaggctgaacagttatccccgttcaccccaaaatcaaccaaag 447
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ccatgctgactgcagtgcaggctgaacagttatccccgttcaccccaaaatcaaccaaag 682
Query: 448 ccccagcctgaaacaatgaagactcacagaaatactagatcagatgcttctaaacgtgtt 507
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 681 ccccagcctgaaacaatgaagactcacagaaatactagatcagatgcttctaaacatgtt 622
Query: 508 caccacagttcaaaacataactagaaagtgaaatatcttctgtgtttataaactgtagag 567
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 caccacagttcaaaacataactagaaagtgaaatatcttctgtgtttataaactgtagag 562
Query: 568 agagataatattac 581
||||||||||||||
Sbjct: 561 agagataatattac 548
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 581
Length of database: 981
Length adjustment: 10
Effective length of query: 571
Effective length of database: 971
Effective search space: 554441
Effective search space used: 554441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no046_a04.g1 MSMg01no046_a04.g1 CHROMAT_FILE:
MSMg01no046_a04.g1 PHD_FILE: MSMg01no046_a04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 12:06:06 2005
(611 letters)
>mm_chr1_61735129_61736139
Length = 1011
Score = 1158 bits (599), Expect = 0.0
Identities = 607/611 (99%), Gaps = 2/611 (0%)
Strand = Plus / Plus
Query: 1 tttttattttgaaaatattcaagcttacacaaatgtagtcagaatatcttatgagcccct 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tttttattttgaaaatattcaagcttacacaaatgtagtcagaatatcttatgagcccct 260
Query: 61 ttcctccacaaatctccatcactcagcttctgaatcattagctgtggtcagtgtggcttt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttcctccacaaatctccatcactcagcttctgaatcattagctgtggtcagtgtggcttt 320
Query: 121 gcctttttttttaacctctgcttttctaatgattttgttgcctgttttctttttgtacat 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcctttttttttaacctctgcttttctaatgattttgttgcctgttttctttttgtacat 380
Query: 181 tctgagcatcttgtagtggacagacagggctttctgtgtgacagtggggctatattgagc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tctgagcatcttgtagtggacagacagggctttctgtgtgacagtggggctatattgagc 440
Query: 241 attgtttaattcttgtatttgtatatttatatctagttcatgagtacatgtatgtttgtg 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 attgtttaattcttgtatttgtatatttatatctagttcatgagtacatgtatgtttgtg 500
Query: 301 catgtgtgcattgtgtgtgtgtgtgtttaaagagactacaattcatctgaagctagaatt 360
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 501 catgtgtgcattgtgtgtgtgtgt--ttaaagagactacaattcatctgaagctagaatt 558
Query: 361 acaggttgttgtgtgccagatattctgggttctgggaaactaattcagatcttctttaag 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 559 acaggttgttgtgtgccagatattctgggttctgggaaactaattcagatcttctttaag 618
Query: 421 actagaagtgctcttgactcctaacccatctcttcagaaaataatcctgagcattatttt 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 619 actagaagtgctcttgactcctaacccatctcttcagaaaataatcctgagcattatttt 678
Query: 481 ccaagtaatttctatcctttttatttggacaacctgagagagaatgtatgaagctgacta 540
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 679 ccaagtaatttctatcctttttatttggacaacctgagagagaatgtatgaagctgacta 738
Query: 541 tgttttgaattgttgaacagaatgaccataagatatggaaactctactttgnngtccaag 600
||||||||||||||||||||||||||||||||||||||||||||||||||| |||||||
Sbjct: 739 tgttttgaattgttgaacagaatgaccataagatatggaaactctactttggggtccaag 798
Query: 601 tttgaatcaca 611
|||||||||||
Sbjct: 799 tttgaatcaca 809
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 611
Length of database: 1011
Length adjustment: 10
Effective length of query: 601
Effective length of database: 1001
Effective search space: 601601
Effective search space used: 601601
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
