XXXXXXXXXXXXXXXXXXXXXXXXXXXXTCCGAAATCCGCGGAATTCTTG
TTTGTTCCGCCGAGTAGTGAAATTTACTCCATTGTGTAAAGGACCATATT
TTCTGTGTCCATTCCTCTGTTGAAGGACATCTGGGTTCTTTCTAGCTTCT
TGCTATTATAAATAAGGCTGCTATGAACATAGTGGAGCATGTGTCCTTAT
TACTGGTTGAAACATCTTCTGTTTAAATGCCCAGTGGTATTGCTAGATCT
TCTGTTAGAACTTTGTCCAATATTCTGAGGAACCGCCAAACTGATTTCCA
GAGTGGTTGTACCAGCTTGCAATCCCACCAGCAGTAGACATAAGGCATTG
CTGATATACTTGACTTCCCCAATCTCTGTGGTAATTTTGGTAGTTTTATG
CATTGGCTTTTATATTTTATGTATGTGTATATTTCTAATCATTCTTGTGA
TAAAAAGGTTTCTCATTTCCACTCCTATGTTTTATTTAGTTACCACTTCA
AAACTTATTTTACTGTAATCATTAGTGCCTATAAAAGAACTATTCGGTTT
TTAAAAGTGGAATGGCTGTAATCTCCTAGGTTACTGTACATTTTATCTAT
AGAAGACTTGAATTTTTAAAATAAATTTTCTAACAGCTTTTATACATTTT
TCAGGGATAATCTTTTGTTATTTGATGAAGTTAGAGTTTATTCCCCAAAA
A

TGTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXCTGATCTTTCCAAGACTTTTATCATGAATGGGTG
TTGTATTTTTTCAAATGCTTTCTCAGCTTCTAATGAGATGATCATGTGGT
TTTTGTCTTTGAGTTTGTTTGTATACTGGATTACATTGATTGATTTCTGT
ATATTGAAACATCTCTGCATCCCTGGGATGAAACCTACTTGGTCAGGATG
GATGATTGTTTTGATATGTTCTTGGATTCAGTTAGTGAGAACTTTATTGA
GGATTTTGGCATCGATATTCATAAGGGAAATTGGTCTGAAGTTCTCTATC
TTTGTTGGGTCTTTTTGCGCTTCAGGTATCAGAGTAATTGTGGCTTCATA
GAATGACTTGCCTAGAGTACCTTCTGTTTCTATTTTGTGGAATAGTTTGC
GAAGAACTGGAATTAGATCTTCTTTGAACGTCTGATAGAACTATGCACTA
AACCTATCTTGTCCTGAGCTTTTTTTTTTTGGTTGGGAGATTATTAATGA
CTGCTTCTTTTTCTTTATGGGATATAGGACTGTTTAGATCATTAAACTGA
TCTTGATTTAACTTTGGTACCTGGTATCTGTCTAGAAACTTGCCCATTTC
CTCCAGGTTCTTCAGTTTTGTTGCATATTACCTTTGGATAACGATCTGAT
GA

Query= MSMg01no052_h18.b1 MSMg01no052_h18.b1 CHROMAT_FILE:
MSMg01no052_h18.b1 PHD_FILE: MSMg01no052_h18.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 16:53:07 2005
         (567 letters)



>mm_chr1_147538549_147539515
          Length = 967

 Score =  940 bits (486), Expect = 0.0
 Identities = 495/498 (99%)
 Strand = Plus / Minus

                                                                       
Query: 70  tttctagcttcttgctattataaataaggctgctatgaacatagtggagcatgtgtcctt 129
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 967 tttctagcttcttgctattataaataaggctgctatgaacatagtggagcatgtgtcctt 908

                                                                       
Query: 130 attactggttgaaacatcttctgtttaaatgcccagtggtattgctagatcttctgttag 189
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 907 attactggttgaaacatcttctgtttaaatgcccagtggtattgctagatcttctgttag 848

                                                                       
Query: 190 aactttgtccaatattctgaggaaccgccaaactgatttccagagtggttgtaccagctt 249
           ||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 847 aactttgtccaatattctgaggaaccgccaagctgatttccagagtggttgtaccagctt 788

                                                                       
Query: 250 gcaatcccaccagcagtagacataaggcattgctgatatacttgacttccccaatctctg 309
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 787 gcaatcccaccagcagtagacataaggcattgctgatatacttgacttccccaatctctg 728

                                                                       
Query: 310 tggtaattttggtagttttatgcattggcttttatattttatgtatgtgtatatttctaa 369
           ||||||||||| |||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 727 tggtaattttgttagttttatgcattggcttttatattttatgtatgtatatatttctaa 668

                                                                       
Query: 370 tcattcttgtgataaaaaggtttctcatttccactcctatgttttatttagttaccactt 429
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 667 tcattcttgtgataaaaaggtttctcatttccactcctatgttttatttagttaccactt 608

                                                                       
Query: 430 caaaacttattttactgtaatcattagtgcctataaaagaactattcggtttttaaaagt 489
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 607 caaaacttattttactgtaatcattagtgcctataaaagaactattcggtttttaaaagt 548

                                                                       
Query: 490 ggaatggctgtaatctcctaggttactgtacattttatctatagaagacttgaattttta 549
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 547 ggaatggctgtaatctcctaggttactgtacattttatctatagaagacttgaattttta 488

                             
Query: 550 aaataaattttctaacag 567
           ||||||||||||||||||
Sbjct: 487 aaataaattttctaacag 470


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 567
Length of database: 967
Length adjustment: 10
Effective length of query: 557
Effective length of database: 957
Effective search space:   533049
Effective search space used:   533049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)