Query= MSMg01no058_e22.b1 MSMg01no058_e22.b1 CHROMAT_FILE:
MSMg01no058_e22.b1 PHD_FILE: MSMg01no058_e22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:00:31 2005
(443 letters)
>mm_chr1_74196963_74197805
Length = 843
Score = 801 bits (414), Expect = 0.0
Identities = 437/446 (97%), Gaps = 3/446 (0%)
Strand = Plus / Minus
Query: 1 agcaagcaatctgttctcactgggtcttaggttcaccgttcataccatgggcaaagagtg 60
|||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 821 agcaagcaatctgttctcactgggtcttaggttcaccgttcatataatgggcaaagagtg 762
Query: 61 aacagctactgcccatagttgttacagggacaaacaagtctctgtgaagcatttagtatg 120
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 761 aacagctactgcccatagttgttacagggacaaacaagtctctgtgaagcatttagaatg 702
Query: 121 a---tcctcctcctcctcctcctcttcatcctctgcctctccctcctcttgcgcctccca 177
| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 701 atcctcctcctcctcctcctcctcttcatcctctgcctctccctcctcttgcgcctccca 642
Query: 178 caattgcagcctcaagtctttcccttcaacctatcatatattctgcagagaggaagatct 237
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 641 caattgcagcctcaagtctttcccttcaacctatcatatattctgcagagaggaagatct 582
Query: 238 tcctaatatataaatatgcttactccatattcccctttaagacctttaaggaccctcaac 297
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 581 tcctaaaatataaatatgcttactccatattcccctttaagacctttaaggaccctcaac 522
Query: 298 agcctcaggtgaagtcagtcctgatgtggtcacacggtattcttgtagttgacctctttt 357
|||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 521 agcctcaggtgaagtcagtcctgatgtggtcacatggtattcttgtagttgacctctttt 462
Query: 358 acttctggccataccttgaactgttcaacctctgagaaccccgtgcggatccctagaggt 417
||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||
Sbjct: 461 acttctggccataccttgaactgttcaacctctgagaaccctgtgcggatccctagaggt 402
Query: 418 ttttccagtcaggggcggggctcgag 443
||||||||||||||||||||||||||
Sbjct: 401 ttttccagtcaggggcggggctcgag 376
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 443
Length of database: 843
Length adjustment: 10
Effective length of query: 433
Effective length of database: 833
Effective search space: 360689
Effective search space used: 360689
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no058_e22.g1 MSMg01no058_e22.g1 CHROMAT_FILE:
MSMg01no058_e22.g1 PHD_FILE: MSMg01no058_e22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:00:31 2005
(195 letters)
>mm_chr1_74071317_74071911
Length = 595
Score = 346 bits (179), Expect = e-100
Identities = 191/195 (97%)
Strand = Plus / Plus
Query: 1 ctgccgtctcagaataaaaggtattgcacatgccagtgaggcggcgctgttctggagtgc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ctgccgtctcagaataaaaggtattgcacatgccagtgaggcggcgctgttctggagtgc 260
Query: 61 tcacacagcttgtgcaaaggtaccgcccagtaggcatctgggaaatcggcacctgatgca 120
||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 261 tcacacagcttgtgcaaaggtacagcccagtaggcatctgggaaatcggcacctgatgca 320
Query: 121 ggcgccaggtctctgtcctgagtgcaggggctgatcccactctcaagcggtctctgaaat 180
||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 321 ggcgccaggcctctgtcctgagtgcaggggctgagcccactctcaagcagtctctgaaat 380
Query: 181 gcagacatcaggaaa 195
|||||||||||||||
Sbjct: 381 gcagacatcaggaaa 395
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 195
Length of database: 595
Length adjustment: 8
Effective length of query: 187
Effective length of database: 587
Effective search space: 109769
Effective search space used: 109769
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
