Query= MSMg01no058_l23.b1 MSMg01no058_l23.b1 CHROMAT_FILE:
MSMg01no058_l23.b1 PHD_FILE: MSMg01no058_l23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:04 2005
(187 letters)
>mm_chr1_35482470_35483056
Length = 587
Score = 346 bits (179), Expect = e-100
Identities = 185/187 (98%)
Strand = Plus / Minus
Query: 1 aatcataaaataaacactaccagcactgggaagttttactatgttctcttagcttcaggt 60
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 387 aatcataaaataaacactaccagcgctgggaagttttactatgttctcttagcttcaggt 328
Query: 61 ttttaaagaaatttaggcctataagaatattcatgtcgcatcccagaattagggacccag 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 327 ttttaaagaaatttaggcctataagaatattcatgtcgcatcccagaattagggacccag 268
Query: 121 gcatgcagtttatgccaaatgccaacaaacaacattctggctttctttttctctcttcat 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 267 gcatgcagtttatgccaaatgccaacaaacaactttctggctttctttttctctcttcat 208
Query: 181 gctggaa 187
|||||||
Sbjct: 207 gctggaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 187
Length of database: 587
Length adjustment: 8
Effective length of query: 179
Effective length of database: 579
Effective search space: 103641
Effective search space used: 103641
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no058_l23.g1 MSMg01no058_l23.g1 CHROMAT_FILE:
MSMg01no058_l23.g1 PHD_FILE: MSMg01no058_l23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:04 2005
(254 letters)
>mm_chr1_35326952_35327604
Length = 653
Score = 389 bits (201), Expect = e-112
Identities = 240/259 (92%), Gaps = 13/259 (5%)
Strand = Plus / Plus
Query: 1 aattcctctttatggtagtcattgagctggcctcacatctggtctctagagtgtaagcaa 60
||||||||||||||| |||||||||||||||||| |||||||||||||||||||||
Sbjct: 201 aattcctctttatggcagtcattgagctggcctc-----tggtctctagagtgtaagcaa 255
Query: 61 gctctcaggctgctgtcatgctgggctgggtctctactaccactatcacaggggatacaa 120
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 256 gctctcagactgctgtcatgctgggctgggtctctactaccactatcacaggggatacaa 315
Query: 121 atccaaatctggagaaaat----gtcccaataagaatgaatctcagccccttctctgaca 176
||||| ||||||||||||| ||||||||||||||||| |||||||||||||||||
Sbjct: 316 atccatatctggagaaaattaatgtcccaataagaatgaacctcagccccttctctga-- 373
Query: 177 t--aagacatctaatatgactggctcaccatcaggcagctggctggccacccatagggaa 234
| ||||||||||||||||||| |||||||||||| ||||||||||||||||||||||||
Sbjct: 374 tggaagacatctaatatgactgactcaccatcaggaagctggctggccacccatagggaa 433
Query: 235 tggtgtcatatcattggca 253
|||||||||||||||||||
Sbjct: 434 tggtgtcatatcattggca 452
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 254
Length of database: 653
Length adjustment: 9
Effective length of query: 245
Effective length of database: 644
Effective search space: 157780
Effective search space used: 157780
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
