TCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAGAGAAGCGCGGAAT
TCATAAAAATATTGCGTTTTGTTAGATGTGATGGCACGTGCCTTTAATTC
CAGCACTTGGTAGGAAGGACAGGAAAAATCACAAGTTTGAGGCAACCTGG
GCTACTTAGTGAGGCCAGTTGGGGCTCCAAAGTGGGCTCACCTAACCAGA
CAACTGGCCATCCGCTCACTCACTCACCTACCCACCCATCCAGTCAACCA
AAACTTAATATGACAAACAAATAATGACCAACCAACCAACCAACCAACCA
ACCAACCAACCAACCAACCAAAAAACATCTCACTCCAGTTCCTATAAGGC
CTAGACCTGGAACTGCCACATGGTCATATCTGACCTACTTTACTGGTCAA
AATAAGTTATTGTACCACCCGGTTTTGTGTCAATTTGACACAAACTAGAG
TCATCACAGAGGAAGGAGCCTCAGTTGAGGAACTGCTTCCATGAGATCCA
GTTGTAAAGCATTTTCTCAATTAGTGATTGGTGGGGGAGGAACCATGCCA
TTGTGGGTGGTACCATCTCTAGGCTGGTGGTCCTAGGTTCTATAAGATAG
CAGTTGAGCAAGCCTTAGGGCGCAAGGTAGTATGTAGTACACCTCCATGG
CCTCTGTATTATTACTGTCTTGCAGGTTTTCGCCGCCATTGCTTTTTGAC
GATGATCGGCCTATTGGAATCATTC

AATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXATAATAGAAAGTCCTGGCTTCACTCTTCA
ATTTCACCAAACTTAAAGAAAGCATATTCTAATTCTCAATCTATTTGAAA
GAATTAGAAGGTACCCTTTCAAACTCGGCCTGAGGCAGGTATTACCCTGG
TACCAAAATCTGACAAGGACACAGCAAAGAACTATAGGCCAACATCACTG
ATGAGAAACACAAAGAAATGCTATTTACCCCAGACAGGAAACTAACAAAA
CAAATTATTTCATCCAAATCCAGATTGGTGTACCAATGAATTTATTAGCT
ATTTACAGGATCAAGGGAGACTCAAACACAGCTGCCTCACTAAAAACCAA
AAACTGTGATGACGCCTCAAGAAAGCTGTGTTAGTGCAGCTCAACCTCCC
GCAGTGTTCTGTGCCTTGTGTGCGCAACCAGCCCTTGAGACCATGTCAGT
GGGAGCAGAACTCTGCACAGTTGATGAAGAATCTCAAAGGAGAGTCAGAG
GACTCCCCCATCCTGTGAGGGGCTGTAAAAAAAGCCTGGTATTTGAGTGT
CCTTTGTAATTAAGTAGCTGTTCTTATATCAAAATGTCAATGCCCATGCC
ATGCCCAGAAGACAGAGTTCCAACATACCCATTTATATGTACAATAAATA
GGAATTAATTTAAGTATGTCCATAGCA

Query= MSMg01no059_c14.g1 MSMg01no059_c14.g1 CHROMAT_FILE:
MSMg01no059_c14.g1 PHD_FILE: MSMg01no059_c14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:36 2005
         (619 letters)



>mm_chr1_159701797_159702814
          Length = 1018

 Score =  861 bits (445), Expect = 0.0
 Identities = 457/461 (99%), Gaps = 1/461 (0%)
 Strand = Plus / Minus

                                                                        
Query: 159  aactataggccaacatcactgatgagaaacacaaagaaatgctatttaccccagacagga 218
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1018 aactataggccaacatcactgatgagaaacacaaagaaatgctatttaccccagacagga 959

                                                                        
Query: 219  aactaacaaaacaaattatttcatccaaatccagattggtgtaccaatgaatttattagc 278
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 958  aactaacaaaacaaattatttcatccaaatccagattggtgtaccaatgaatttattagc 899

                                                                        
Query: 279  tatttacaggatcaagggagactcaaacacagctgcctcactaaaaaccaaaaactgtga 338
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 898  tatttacaggatcaagggagactcaaacacagctgcctcactaaaaaccaaaaactgtga 839

                                                                        
Query: 339  tgacgcctcaagaaagctgtgttagtgcagctcaacctcccgcagtgttctgtgccttgt 398
            |||||||| |||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 838  tgacgccttaagaaagctgcgttagtgcagctcaacctcccgcagtgttctgtgccttgt 779

                                                                        
Query: 399  gtgcgcaaccagcccttgagaccatgtcagtgggagcagaactctgcacagttgatgaag 458
            ||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 778  gtgcgcaaccagcccctgagaccatgtcagtgggagcagaactctgcacagttgatgaag 719

                                                                        
Query: 459  aatctcaaaggagagtcagaggactcccccatcctgtgaggggctgtaaaaaaagcctgg 518
            ||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 718  aatctcaaaggagagtcagaggactcccccatcctgtgaggggctgt-aaaaaagcctgg 660

                                                                        
Query: 519  tatttgagtgtcctttgtaattaagtagctgttcttatatcaaaatgtcaatgcccatgc 578
            ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 659  tatttgagtgtcctttgtaattaagtagctgttcttatatcaaaatgtcaatgcccatgc 600

                                                     
Query: 579  catgcccagaagacagagttccaacatacccatttatatgt 619
            |||||||||||||||||||||||||||||||||||||||||
Sbjct: 599  catgcccagaagacagagttccaacatacccatttatatgt 559


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 619
Length of database: 1018
Length adjustment: 10
Effective length of query: 609
Effective length of database: 1008
Effective search space:   613872
Effective search space used:   613872
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)