ATCATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCGAGAATGCGCGG
AATTCAAGATCAGCCTACCCAGAAAGAAAGATAGGAAGTGGAAACCAAGC
AAGGCTGAGAGTGCAGAGAGCCAGTGGAAAACCTTAAAGGGCTAGAAAAC
GGGTCTTCCTTGGCCTCTACAAAAGTCCCAGTGAAATATCTGCCAAGTTG
TCAGAGTCAGTATCTCAGAGCCCAGGTGAAGAGCTGTAACACTGACTGCT
TTCAAGAGCTGCCGGTCCTGATACCCAGGCCCAGCATAGAAACTGTAACA
TCTTTTGGGTTAAGGGCCATGGTACCCCAATCCACAGGGACTGTCATGTT
AGAGGAGGCTTCTGCTGCTGCTTTGATCTGCCTATTGCTGCTGCCTGCTT
CTGGCAAACACTAGCAGGGCACGCAGGCCTCTAGGGACCAGCATTTAAAG
AGTGTTTCCCTGCATGCTCACCACTTTCATCTTCACGGGGGGTGGGGGTG
GGGGTNTNTTNNTTTTTCTTTTCCTCTTTCTCTTTTTTTCTTCCTTCTTC
TCCTTCCTCCCCTTTCGTTTCTTTTTTCTCCTGTCTCTTCTTTCCCGCGC
TCTTTTTTTTTTTTCATTTTTTTCCTCTTTCCCCCTTCCATTTTTGTTAC
CCCTTTTTCTTCCCCTCCTTCTTTTTCTCTCTCCCTTTCTTTTTCCCCTC
TTTTTCATTTTCCCCTTTTTTTTTCTCTCCCTCTCTTATT

NCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTCATCCGAGGAATACCGAATGGCTGAG
AAGCACCTGAAAAAATGTTCAACATCCTTAATCATCAGAGAAATGCAAAT
CAAAACAACCCTGAGATTCCATCTCACACCAATCAGAATGGCTAAAATCA
AAAATTCAGGTGACAGCAGATGCTGGCAAGGATGTGGAGAAAGAGGAACA
CTCCTCCATTGTTGGTGGGATTGCAAGCTTGTACAACCACTCTGGAAATC
AGTCTGGCGGTTCCTCAGAAAATTGTACATAGTACTTACGGAGGATCCCT
CAATACCTCTCCTGGGCATATATCCAGAAGATGTCCCAACTGGTAAGAAG
GACACATGCTCCACTATGCTCATAGCAGCCTTATTTATAATAGCCAGAAG
CTGGAAAGAACCCAGATGCCCCTCAACAGAGGAATGGATACAGAAAATGT
GGTACATTTACACAATGGAGTACTACTCAGCTATTAAAAAGAATGAATTT
GTGAAATTCCTAGGCAAATGGTTGGACCTGGAGGGCATCATCCTGAGTGA
GGTAACACAACCACTTTCTTTAAACTCCTAGCAATGTGTGGATGTTTTTT
TAGCTGCAGGTGTACTCTTGTATGTATAACACATTAATAATTCTGATTCT
TTATAACTCAGCTTCTCCAT

Query= MSMg01no059_g20.b1 MSMg01no059_g20.b1 CHROMAT_FILE:
MSMg01no059_g20.b1 PHD_FILE: MSMg01no059_g20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:01:55 2005
         (456 letters)



>mm_chr1_177319608_177320463
          Length = 856

 Score =  839 bits (434), Expect = 0.0
 Identities = 449/454 (98%)
 Strand = Plus / Minus

                                                                       
Query: 3   gaattcaagatcagcctacccagaaagaaagataggaagtggaaaccaagcaaggctgag 62
           |||||||||||||||| |  ||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 gaattcaagatcagccaaggcagaaagaaagataggaagtggaaaccaagcaaggctgag 597

                                                                       
Query: 63  agtgcagagagccagtggaaaaccttaaagggctagaaaacgggtcttccttggcctcta 122
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 agtgcagagagccagtggaaaaccttaaagggctagaaaacgggtcttccttggcctcta 537

                                                                       
Query: 123 caaaagtcccagtgaaatatctgccaagttgtcagagtcagtatctcagagcccaggtga 182
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 536 caaaagtcccagtgaaatatctgccaagttgtcagagtcagtatctcagagcccaggtga 477

                                                                       
Query: 183 agagctgtaacactgactgctttcaagagctgccggtcctgatacccaggcccagcatag 242
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 476 agagctgtaacactgactgctttcaagagctgccggtcctgatacccaggcccagcatag 417

                                                                       
Query: 243 aaactgtaacatcttttgggttaagggccatggtaccccaatccacagggactgtcatgt 302
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 416 aaactgtaacatcttttgggttaagggccatggtaccccaatccacagggactgtcatgt 357

                                                                       
Query: 303 tagaggaggcttctgctgctgctttgatctgcctattgctgctgcctgcttctggcaaac 362
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 tagaggaggcttctgctgctgctttgatctgcctattgctgctgcctgcttctggcaaac 297

                                                                       
Query: 363 actagcagggcacgcaggcctctagggaccagcatttaaagagtgtttccctgcatgctc 422
           |||||||||||| | |||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 296 actagcagggcatggaggcctctagggaccagcatttaaagagtgtttccctgcatgctc 237

                                             
Query: 423 accactttcatcttcacggggggtgggggtgggg 456
           ||||||||||||||||||||||||||||||||||
Sbjct: 236 accactttcatcttcacggggggtgggggtgggg 203


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 456
Length of database: 856
Length adjustment: 10
Effective length of query: 446
Effective length of database: 846
Effective search space:   377316
Effective search space used:   377316
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)