NACCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCG
CGGAATTCAGTTGGTTATCCGATGGGGATTGCATTGAATCTATAGATTGC
CTTGGATAGTTTTTACTATGTTAATTCTGGCAACCCATGAGCACGGGAGA
TCTCTCCATTTTCTGAGATCTTCTTCAATTTCTTTCTTGAGAGATGTGAA
GTTATTGTCATATAGGTCTTTCACTTGTTTGGTTAGAGTTACCCAAAGAT
ATTTTTTATTATTTGTGGCTATTGTGAAGGGAGTTGTTTCCCTAATTTCT
TTCTCAGCCTGTTTATCCTTTATATAAAGGAAGATTACTGATTTATTTGA
CTTAATTTTATATCCAGCAACTTGGCTGAGAGTGTTTATCAGCTAGAGAA
GTTCTCTGATAGAAGTTTTGGGGATGCTTATGTATACAATCATATCATCT
GCAAATAGTGATACCTTTATTTCTCCTTTACCAATTTGTATCTCCTTTAG
CTCTTCTTGTTGTTTTATTGTTCTAGCTAACACTTCCAGTACTATATTGA
ATAGATATGATGAGAGTGGGTATCCTTGTCTTGTCTCCAATTTCAGTGAG
ATTGATTCAAGTATGTCTCCATTTAATTTGATATTGGCTGTTGGTTTGAA
CCAAATTGCTTTTTTACACTGCAGCCCAGCTAGAAAAAGGCATACTGGGA
ACAGCTTTTGAATATATCCTCTGTTTCATTT

ATGCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXCAAAAAAAACCATGGGACAGCTGCATTA
TCCTCTTTCGTATTACATGAGAGACCCCCTAATAATGCTAAGCTGTGATA
TTTAGTTCATCAGTAATAACAGTTTGGATTTAGGGAACAGTTGCATTGAT
TAACCAATATAATTTCAAGAAGACACAGGAAAGCATAATTACCAAGCTCT
GGTCTTACAAACATCTCTGTGCAGGTTGGACTGCCCATGTAGACACAAAT
CCCTTCCTTACTCTGAGAGAAGAGTGGATCAGGAAGGAAGAAGAAAGGAA
GAAGGGGTTGGAGGCGTGGGGTGCTGACACATGTTCTGGGATGTAAGTTT
TAATATTCAACATATTTTGAGTCCTATTGACATCTTCAGCTCTAATGACA
GAGAAAGCTATTACAATGGGAATTTAAAGAAAATAGTATCAAATAGCTAA
ATTAAAGAAATGAAGGATTTGGATAGTTGTGTTAACTGGGCAAGTATCTT
TGTCTTTCTGTTCTTCCTTTTTAATAGTGAAATAGTAGTAGAGATTCCTT
GTAAAAATCTTAGCGTTTGTGTTAATGCACCACAAATGCTAAAGTGTTAC
TATTATTTTATACCTATATCTGAGATTGGAGTTAAATGGATCTATACTAC
CTATTTCTN

Query= MSMg01no061_n24.g1 MSMg01no061_n24.g1 CHROMAT_FILE:
MSMg01no061_n24.g1 PHD_FILE: MSMg01no061_n24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:04:58 2005
         (630 letters)



>mm_chr1_12106398_12107429
          Length = 1032

 Score = 1151 bits (595), Expect = 0.0
 Identities = 620/629 (98%), Gaps = 2/629 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   caaaaaaaaccatgggacagctgcattatcctctttcgtattacat--gagagaccccct 58
           ||||||||||||||||||||||||||||||||||||||||||||||  ||||||||||||
Sbjct: 829 caaaaaaaaccatgggacagctgcattatcctctttcgtattacataggagagaccccct 770

                                                                       
Query: 59  aataatgctaagctgtgatatttagttcatcagtaataacagtttggatttagggaacag 118
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 769 aataatgctaagctgtgatatttagttcatcagtaataacagtttggatttagggaacag 710

                                                                       
Query: 119 ttgcattgattaaccaatataatttcaagaagacacaggaaagcataattaccaagctct 178
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 709 ttgcattgattaaccaatataatttccagaagacacaggaaagcataattaccaagctct 650

                                                                       
Query: 179 ggtcttacaaacatctctgtgcaggttggactgcccatgtagacacaaatcccttcctta 238
           |||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 649 ggtcttccaaacatctctgtgcaggttggactgcccatgtagacacaaatcccttcctta 590

                                                                       
Query: 239 ctctgagagaagagtggatcaggaaggaagaagaaaggaagaaggggttggaggcgtggg 298
           ||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 589 ctctgagagaagagtggatcaggaagggagaagaaaggaagaaggggttggaggcgtggg 530

                                                                       
Query: 299 gtgctgacacatgttctgggatgtaagttttaatattcaacatattttgagtcctattga 358
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 529 gtgctgacacatgttctggggtgtaagttttaatattcaacatattttgagtcctattga 470

                                                                       
Query: 359 catcttcagctctaatgacagagaaagctattacaatgggaatttaaagaaaatagtatc 418
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 469 caccttcagctctaatgacagagaaagctattacaatgggaatttaaagaaaatagtatc 410

                                                                       
Query: 419 aaatagctaaattaaagaaatgaaggatttggatagttgtgttaactgggcaagtatctt 478
           |||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 409 aaatagctaaattaaagaaacgaaggatttggatagttgtgttaactgggcaagtatctt 350

                                                                       
Query: 479 tgtctttctgttcttcctttttaatagtgaaatagtagtagagattccttgtaaaaatct 538
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 349 tgtctttctgttcttcctttttaatagtgaaatagtagtagagattccatgtaaaaatct 290

                                                                       
Query: 539 tagcgtttgtgttaatgcaccacaaatgctaaagtgttactattattttatacctatatc 598
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 289 tagcgtttgtgttaatgcaccacaaatgctaaagtgttactattattttatacctatatc 230

                                        
Query: 599 tgagattggagttaaatggatctatacta 627
           |||||||||||||||||||||||||||||
Sbjct: 229 tgagattggagttaaatggatctatacta 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 630
Length of database: 1032
Length adjustment: 10
Effective length of query: 620
Effective length of database: 1022
Effective search space:   633640
Effective search space used:   633640
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)