XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCTTCATA
GGTGAAAATCTATATGGCTTAGACCCTTTCTTTTTTATAAAAATGAAAAT
CTTTTGTGTAGCTTTTACTTATGCTAATATTTAAGCATGCAAATACTACA
TGCAATAAAGAAAAGTCATGGTCATAAATTAATAGAAGTATTTACTTTTA
ATGATGATTCTGAGTAAAGGAATTCTTTTTAAATTCAGATTTGTACTGTC
ATGGTGACATCAGCTCTCTCATATTCAAATCACATGTAATACTAGTTGAT
TTATACTTCAACAGTGATTAGGAACTTTTTCAAAGTTTGTTGATTATTGG
CTCATTCTGAGGAATGGAGAGGATACAGGATAGTTTGGTAAAAGGAATAT
AAGTGAATGCTATTTATGATTGATTTTATTGATGATTAATATCCCAATAA
TTTTAATTTGGCCATTTAATAATTAATAATTAACTTGACATCTTCCTTAT
AATACTGATGAGAAATACAATAATACATATTTTAAATATTAAGCTATATG
TTACAAAATTGAGGTTGTTAATTCATTAAGAAAAAAAATGCTGATTTGGG
CTCACAGATTGAAGGTTTTCATCCATGGTTTAGAAAAAAAGAAGACCTAC
TCACCTCATGGTGAGACAGCA

XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXAGAGCCAGTTTTATTATTATTATTATTTTTTTTTGTGGTTGTTTGT
TTGGTTGGTTGGTTTCAATTTTTTGTTTTTTGTTTGCAGAACAATTCAGA
AGCAGAATGAAGACAAGTTGAATAAATCAGATTTGAGAGGATTTTTAAGC
CAAAACAGCTGAGTTGAATGAACCACCCAGAGTTCAGAAAGAGCTAAGAA
AAAAAATGATGTTGATTTATCAGTAAGCCTCACAAGACAGACAATATCCC
ATATCTGGAACTGAGATTTTTATTTATCAATCTATATTTCTTGTAGTACC
ATTCGCCTTCCCGTGCAGGTATTTCTGTTCAAACTCCCATGAAATATATA
CACATACATGTACATATGTGCACAGGCACACACACACACACACACACATA
CACCAGTACTAGGGGATTTTCAGAAGACTTTTTCATATACTCTTGGTTGT
AGCTAAGCTGTTCTAGTCTTTCCTCTCCTCATTTCTCCTATATTCATATA
AACTTTTAACTCAATTTTACAGTCTCATCTCTGTTCCTGCTATATGAGCC
TCCCCACCATTGAATTCTCCTGGGGATGTTCCATTATAGGTTCCATGCGG
TTTTTTCCCTGCACC

Query= MSMg01no063_b07.b1 MSMg01no063_b07.b1 CHROMAT_FILE:
MSMg01no063_b07.b1 PHD_FILE: MSMg01no063_b07.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:07:17 2005
         (627 letters)



>mm_chr1_17686257_17687283
          Length = 1027

 Score = 1181 bits (611), Expect = 0.0
 Identities = 620/623 (99%)
 Strand = Plus / Plus

                                                                       
Query: 5   gaattcttcataggtgaaaatctatatggcttagaccctttcttttttataaaaatgaaa 64
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcttcataggtgaaaatctatatggcttagaccctttcttttttataaaaatgaaa 264

                                                                       
Query: 65  atcttttgtgtagcttttacttatgctaatatttaagcatgcaaatactacatgcaataa 124
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atcttttgtgtagcttttacttatgctaatatttaagcatgcaaatactacatgcaataa 324

                                                                       
Query: 125 agaaaagtcatggtcataaattaatagaagtatttacttttaatgatgattctgagtaaa 184
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agaaaagtcatggtcataaattaatagaagtatttacttttaatgatgattctgagtaaa 384

                                                                       
Query: 185 ggaattctttttaaattcagatttgtactgtcatggtgacatcagctctctcatattcaa 244
           || |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 gggattctttttaaattcagatttgtactgtcatggtgacatcagctctctcatattcaa 444

                                                                       
Query: 245 atcacatgtaatactagttgatttatacttcaacagtgattaggaactttttcaaagttt 304
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 atcacatgtaatactagttgatttatacttcaacagtgattaggaactttttcaaagttt 504

                                                                       
Query: 305 gttgattattggctcattctgaggaatggagaggatacaggatagtttggtaaaaggaat 364
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gttgattattggctcattctgaggaatggagaggatacaggatagtttggtaaaaggaat 564

                                                                       
Query: 365 ataagtgaatgctatttatgattgattttattgatgattaatatcccaataattttaatt 424
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 ataagtgaatgctatttatgattgattttattgatgattaatatcccaataattttaatt 624

                                                                       
Query: 425 tggccatttaataattaataattaacttgacatcttccttataatactgatgagaaatac 484
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||| 
Sbjct: 625 tggccatttaataattaataattaacttgacatcttccttataatactgatgagaaataa 684

                                                                       
Query: 485 aataatacatattttaaatattaagctatatgttacaaaattgaggttgttaattcatta 544
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 685 aataatacatattttaaatattaagctatatgttacaaaattgaggttgttaattcatta 744

                                                                       
Query: 545 agaaaaaaaatgctgatttgggctcacagattgaaggttttcatccatggtttagaaaaa 604
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 agaaaaaaaatgctgatttgggctcacagattgaaggttttcatccatggtttagaaaaa 804

                                  
Query: 605 aagaagacctactcacctcatgg 627
           ||||| |||||||||||||||||
Sbjct: 805 aagaaaacctactcacctcatgg 827


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 35
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 627
Length of database: 1027
Length adjustment: 10
Effective length of query: 617
Effective length of database: 1017
Effective search space:   627489
Effective search space used:   627489
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)