CAGAATTTGCGGCGCTATACGACTCCTATATCGAGAGATCCGCGGAATTC
ACCATTTTTAATAGCTGAGCAGACTACATTGTATAAATGCAACACATTTT
CTGAATCCATTCCTCTGTTGAAGGACATCTGTGTTTTTTTCTAGATCCTG
GCTATTATAAATAAGGCTGCTATGAACATAGTGGATAATGCATGTTGGAG
CATCTTCTGGGTGTATGTTGAGGAGTGGTACACCTGAGTCCTCAGGTGAT
ACTATATACACTTTTCATAGGAACTGCCAGACATATTTCCAGAGTTGTTG
TACCAGTTTGTATACACACAAGCAATGGTAGAATGTTCCTCCTTCTCTAC
ATCCTCACCAGCATCTGCTGTCACCTGAGTTTTTGATTTTAGCCATTCTG
ACTGATGTGAGGTGGAATCTCAGGTTTGTTTTGATTTGCATTTCTCTGAT
GACTAAGACTATTGTACATTCCTTTAGGTGCTTCTTTGCCATTTGACATT
CCTCAGTTGAAAATTCTTCGTTAAGGTCTGTACCCCATTTTTAATGGGGC
TATTTGGTTCTCTGGAGTCAAAAATCTTGAGTTCTTTGTATGTATTGGAT
AGCAGCCCTCTGTCAGATGTAAGATTGGTAAAGACCTACCCCAATCTCTT
TGCAAATGATATGATCTTATTGTCTAGTGACCAAAAATAAATCCT

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTAAGAGACTAGGGGTATAAGTATGTAT
TGGCATTGCTTTTGGTTACATTCCAGAATTGGAGTTTAAGACCGTTTTGA
AAATTGTAAAAAATTATTCAACCCCATGTAGATTTTTATTTACCTACAGA
GCAACTCACTGAACAGAACAAACTTCACACACACAAGCAGACAGAGAAAA
ACATTGGGAGATGATGCACATGTTCATTTCTATTGCCTCTGATACACTGG
CATGGGAAAATCTATGAAAGGCCTCTAAGGATATGAGTTATGCTTACCTA
ATTTAAGGTATAACCTTAATTACCAGATGCTATATGTTACATATCCATTT
TTACTATATATACCTTTCTTTCCTTCTATTCTATCAATACCATTTGTTAC
AGTTAAATATATATATTTTCATGGACATCCACTTACTTTTCTATGTTGTA
AACATCTTGTAGACAATTACATTTGATTACTCAAATTTGGGGAGAAAATT
GAGTAAGCTTCTTAAAAGATAATTTAAGAATACTTTTTTCCAGGATTTTT
ACTGTTTTCTTTTACAAGGTGCACATTGTCTTACTCCTCTCTGTGTTAGA
AATGGGGCTGAGTCGCAAGATTTTATATACATAATTCAAAGAATTTGGC

Query= MSMg01no063_p18.g1 MSMg01no063_p18.g1 CHROMAT_FILE:
MSMg01no063_p18.g1 PHD_FILE: MSMg01no063_p18.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:08:33 2005
         (590 letters)



>mm_chr1_105732105_105733094
          Length = 990

 Score = 1125 bits (582), Expect = 0.0
 Identities = 588/590 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   taagagactaggggtataagtatgtattggcattgcttttggttacattccagaattgga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 taagagactaggggtataagtatgtattggcattgcttttggttacattccagaattgga 260

                                                                       
Query: 61  gtttaagaccgttttgaaaattgtaaaaaattattcaaccccatgtagatttttatttac 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gtttaagaccgttttgaaaattgtaaaaaattattcaaccccatgtagatttttatttac 320

                                                                       
Query: 121 ctacagagcaactcactgaacagaacaaacttcacacacacaagcagacagagaaaaaca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ctacagagcaactcactgaacagaacaaacttcacacacacaagcagacagagaaaaaca 380

                                                                       
Query: 181 ttgggagatgatgcacatgttcatttctattgcctctgatacactggcatgggaaaatct 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttgggagatgatgcacatgttcatttctattgcctctgatacactggcatgggaaaatct 440

                                                                       
Query: 241 atgaaaggcctctaaggatatgagttatgcttacctaatttaaggtataaccttaattac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 atgaaaggcctctaaggatatgagttatgcttacctaatttaaggtataaccttaattac 500

                                                                       
Query: 301 cagatgctatatgttacatatccatttttactatatatacctttctttccttctattcta 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 cagatgctatatgttacatatccatttttactatatatacctttctttccttctattcta 560

                                                                       
Query: 361 tcaataccatttgttacagttaaatatatatattttcatggacatccacttacttttcta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcaataccatttgttacagttaaatatatatattttcatggacatccacttacttttcta 620

                                                                       
Query: 421 tgttgtaaacatcttgtagacaattacatttgattactcaaatttggggagaaaattgag 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tgttgtaaacatcttgtagacaattacatttgattactcaaatttggggagaaaattgag 680

                                                                       
Query: 481 taagcttcttaaaagataatttaagaatacttttttccaggatttttactgttttctttt 540
           ||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 681 taagcttcttaaaagataatttaagaatatttttttccaggatttttactgttttctttt 740

                                                             
Query: 541 acaaggtgcacattgtcttactcctctctgtgttagaaatggggctgagt 590
           |||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 741 acaaggtgcacattgttttactcctctctgtgttagaaatggggctgagt 790


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 29
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 590
Length of database: 990
Length adjustment: 10
Effective length of query: 580
Effective length of database: 980
Effective search space:   568400
Effective search space used:   568400
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)