MoG+ -Mouse Genome database with high added value-

BAC Information

BAC name
Region	Chromosome -
Gene	search by nearby gene name.
Format	rows / page	Page	1

BAC

Clone Name	MSMg01-066O14
Chromosome	1 (Build37)
Map Location	92,017,215 - 92,017,458
singlet/doublet	singlet
Overlap gene	Iqca
Upstream gene	Sh3bp4, LOC383542, EG665688, Centg2, Gbx2, Asb18
Downstream gene	Cxcr7, Cops8, Col6a3, Mlph, Prlh, Rab17, Lrrfip1
Link	Open Mouse BAC browser

Click to get alignment info.

name	Sh3bp4 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:98402 MGI:2138297
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	LOC383542 (CDS detail)
type	gene
link	vega ensembl
xref	GeneID:383542
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 23 ESTs, 9 Proteins pseudo : _no_value

name	EG665688 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:665688 MGI:3647844
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST

name	Centg2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:347722 MGI:2653690
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 2 mRNAs

name	Gbx2 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:14472 MGI:95668
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Asb18 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:208372 MGI:2655109
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Iqca (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:74918 MGI:1922168
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 22 ESTs, 4 Proteins

name	Cxcr7 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12778 MGI:109562
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Cops8 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:108679 MGI:1915363
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Col6a3 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:12835 MGI:88461
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 156 ESTs, 5 Proteins

name	Mlph (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:171531 MGI:2176380
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Prlh (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:623503 MGI:3644668
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins

name	Rab17 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:19329 MGI:104640
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Lrrfip1 (CDS detail)
type	gene
link	vega ensembl MGI
xref	GeneID:16978 MGI:1342770
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA

name	Sh3bp4 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:118130850 GeneID:98402 MGI:2138297
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : SH3-domain binding protein 4 transcript_id : NM_133816.2

name	EG665688 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363813 GeneID:665688 MGI:3647844
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 EST product : predicted gene, EG665688 transcript_id : XM_978743.1

name	Centg2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:80978935 GeneID:347722 MGI:2653690
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : centaurin, gamma 2 transcript_id : NM_178119.3

name	Centg2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:80978936 GeneID:347722 MGI:2653690
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : centaurin, gamma 2 transcript_id : NM_001037136.1

name	Gbx2 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:133892275 GeneID:14472 MGI:95668
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : gastrulation brain homeobox 2 transcript_id : NM_010262.3

name	Asb18 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:21040226 GeneID:208372 MGI:2655109
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : ankyrin repeat and SOCS box-containing 18 transcript_id : NM_139152.1

name	Iqca (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:149234219 GeneID:74918 MGI:1922168
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 1 mRNA, 22 ESTs, 4 Proteins product : IQ motif containing with AAA domain transcript_id : XM_001475953.1

name	Cxcr7 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142357310 GeneID:12778 MGI:109562
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : chemokine (C-X-C motif) receptor 7 transcript_id : NM_007722.3

name	Cops8 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:114158690 GeneID:108679 MGI:1915363
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : COP9 (constitutive photomorphogenic) homolog, subunit 8 (Arabidopsis thaliana) transcript_id : NM_133805.3

name	Col6a3 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:94363815 GeneID:12835 MGI:88461
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 3 mRNAs, 156 ESTs, 5 Proteins product : procollagen, type VI, alpha 3, transcript variant 2 transcript_id : XM_897036.2

name	Mlph (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:87080830 GeneID:171531 MGI:2176380
definition	note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : melanophilin transcript_id : NM_053015.2

name	Prlh (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:82880987 GeneID:623503 MGI:3644668
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 2 Proteins product : prolactin releasing hormone transcript_id : XM_887970.1

name	Rab17 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:142386732 GeneID:19329 MGI:104640
definition	exception : unclassified transcription discrepancy note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : RAB17, member RAS oncogene family transcript_id : NM_008998.3

name	Lrrfip1 (CDS detail)
type	mRNA
link	vega ensembl MGI NCBI
xref	GI:141803260 GeneID:16978 MGI:1342770
definition	exception : mismatches in transcription note : Derived by automated computational analysis using gene prediction method: BestRefseq. Supporting evidence includes similarity to: 1 mRNA product : leucine rich repeat (in FLII) interacting protein 1 transcript_id : NM_008515.2

name	Sh3bp4 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:19527036 CCDS:CCDS15147.1 GeneID:98402 MGI:2138297
definition	codon_start : 1 product : SH3-domain binding protein 4 protein_id : NP_598577.1

name	EG665688 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94363814 GeneID:665688 MGI:3647844
definition	codon_start : 1 product : hypothetical protein protein_id : XP_983837.1

name	Centg2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:30017461 CCDS:CCDS15149.1 GeneID:347722 MGI:2653690
definition	GO_component : GO:0005829 - cytosol [Evidence ISS] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0005096 - GTPase activator activity [Evidence IEA]; GO:0003924 - GTPase activity [Evidence ISS]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0015031 - protein transport [Evidence IEA]; GO:0043087 - regulation of GTPase activity [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform 1 is encoded by transcript variant 1 product : centaurin, gamma 2 isoform 1 protein_id : NP_835220.1

name	Centg2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:80978937 CCDS:CCDS15148.1 GeneID:347722 MGI:2653690
definition	GO_component : GO:0005829 - cytosol [Evidence ISS] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0005096 - GTPase activator activity [Evidence IEA]; GO:0003924 - GTPase activity [Evidence ISS]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0015031 - protein transport [Evidence IEA]; GO:0043087 - regulation of GTPase activity [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 note : isoform 2 is encoded by transcript variant 2 product : centaurin, gamma 2 isoform 2 protein_id : NP_001032213.1

name	Gbx2 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6753952 CCDS:CCDS15150.1 GeneID:14472 MGI:95668
definition	GO_component : GO:0005634 - nucleus [Evidence IEA]; GO:0005667 - transcription factor complex [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA]; GO:0043565 - sequence-specific DNA binding [Evidence IEA]; GO:0003700 - transcription factor activity [Evidence IEA] GO_process : GO:0048483 - autonomic nervous system development [Evidence IMP]; GO:0007411 - axon guidance [Evidence IMP]; GO:0030902 - hindbrain development [Evidence IMP]; GO:0042472 - inner ear morphogenesis [Evidence IMP]; GO:0001755 - neural crest cell migration [Evidence IMP]; GO:0001569 - patterning of blood vessels [Evidence IGI] [Evidence IMP]; GO:0045449 - regulation of transcription [Evidence IEA]; GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA]; GO:0035239 - tube morphogenesis [Evidence IMP] codon_start : 1 note : stimulated by retinoic acid gene 7 product : gastrulation brain homeobox 2 protein_id : NP_034392.1

name	Asb18 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:21040227 CCDS:CCDS15151.1 GeneID:208372 MGI:2655109
definition	GO_component : GO:0005575 - cellular_component [Evidence ND] GO_function : GO:0003674 - molecular_function [Evidence ND] GO_process : GO:0008150 - biological_process [Evidence ND]; GO:0007242 - intracellular signaling cascade [Evidence IEA] codon_start : 1 note : SOCS box protein ASB-18 product : ankyrin repeat and SOCS box-containing 18 protein_id : NP_631891.1

name	Iqca (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:149234220 GeneID:74918 MGI:1922168
definition	codon_start : 1 product : IQ motif containing with AAA domain protein_id : XP_001476003.1

name	Cxcr7 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:31560715 CCDS:CCDS15152.1 GeneID:12778 MGI:109562
definition	GO_component : GO:0016020 - membrane [Evidence IEA] GO_function : GO:0004950 - chemokine receptor activity [Evidence IEA]; GO:0004930 - G-protein coupled receptor activity [Evidence IEA]; GO:0004872 - receptor activity [Evidence IEA]; GO:0001584 - rhodopsin-like receptor activity [Evidence IEA]; GO:0004871 - signal transducer activity [Evidence IEA] GO_process : GO:0006935 - chemotaxis [Evidence IEA]; GO:0006952 - defense response [Evidence IEA]; GO:0007186 - G-protein coupled receptor protein signaling pathway [Evidence IEA]; GO:0007165 - signal transduction [Evidence IEA] codon_start : 1 product : chemokine orphan receptor 1 protein_id : NP_031748.2

name	Cops8 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:114158691 CCDS:CCDS15153.1 GeneID:108679 MGI:1915363
definition	GO_component : GO:0005634 - nucleus [Evidence IDA]; GO:0008180 - signalosome complex [Evidence IDA] GO_function : GO:0005515 - protein binding [Evidence IPI] codon_start : 1 product : COP9 signalosome subunit 8 protein_id : NP_598566.3

name	Col6a3 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:94363816 GeneID:12835 MGI:88461
definition	codon_start : 1 exception : unclassified translation discrepancy note : overriding stop codons product : similar to collagen, type VI, alpha 3, isoform 2 protein_id : XP_902129.2 transl_except : (pos:complement(92672244..92672246),aa:OTHER) transl_except : (pos:complement(92672187..92672189),aa:OTHER) transl_except : (pos:complement(92670168..92670170),aa:OTHER) transl_except : (pos:complement(92670138..92670140),aa:OTHER) transl_except : (pos:complement(92670069..92670071),aa:OTHER) transl_except : (pos:complement(92669557..92669559),aa:OTHER) transl_except : (pos:complement(92664995..92664997),aa:OTHER) transl_except : (pos:complement(92664175..92664177),aa:OTHER)

name	Mlph (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:87080831 CCDS:CCDS15155.1 GeneID:171531 MGI:2176380
definition	GO_component : GO:0015629 - actin cytoskeleton [Evidence IDA]; GO:0042470 - melanosome [Evidence TAS] GO_function : GO:0003779 - actin binding [Evidence IDA]; GO:0046872 - metal ion binding [Evidence IEA]; GO:0017022 - myosin binding [Evidence IDA]; GO:0005515 - protein binding [Evidence IPI]; GO:0017137 - Rab GTPase binding [Evidence IDA]; GO:0008270 - zinc ion binding [Evidence IEA] GO_process : GO:0006886 - intracellular protein transport [Evidence IEA]; GO:0030318 - melanocyte differentiation [Evidence IMP] codon_start : 1 note : leaden product : melanophilin protein_id : NP_443748.2

name	Prlh (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:82880988 GeneID:623503 MGI:3644668
definition	codon_start : 1 product : similar to preproprolactin-releasing peptide protein_id : XP_893063.1

name	Rab17 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6679585 CCDS:CCDS15156.1 GeneID:19329 MGI:104640
definition	GO_component : GO:0005622 - intracellular [Evidence IEA]; GO:0016020 - membrane [Evidence IEA] GO_function : GO:0005525 - GTP binding [Evidence IEA]; GO:0000166 - nucleotide binding [Evidence IEA] GO_process : GO:0015031 - protein transport [Evidence IEA]; GO:0007264 - small GTPase mediated signal transduction [Evidence IEA]; GO:0006810 - transport [Evidence IEA] codon_start : 1 product : RAB17, member RAS oncogene family protein_id : NP_033024.1

name	Lrrfip1 (CDS detail)
type	CDS
link	vega ensembl MGI NCBI
xref	GI:6678722 GeneID:16978 MGI:1342770
definition	GO_component : GO:0005634 - nucleus [Evidence IEA] GO_function : GO:0003677 - DNA binding [Evidence IEA] GO_process : GO:0006355 - regulation of transcription, DNA-dependent [Evidence IEA]; GO:0006350 - transcription [Evidence IEA] codon_start : 1 note : FLAP (FLI LRR associated protein) product : leucine rich repeat (in FLII) interacting protein 1 protein_id : NP_032541.1

name	(CDS detail)
type	STS
link
xref	UniSTS:234170
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:234170
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:165088
definition	standard_name : AI594717

name	(CDS detail)
type	STS
link
xref	UniSTS:178432
definition	standard_name : AW227605

name	(CDS detail)
type	STS
link
xref	UniSTS:22462
definition	standard_name : WI-14192

name	(CDS detail)
type	STS
link
xref	UniSTS:128854
definition	standard_name : D1Mit487

name	(CDS detail)
type	STS
link
xref	UniSTS:224294
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:234171
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:162037
definition	standard_name : RH125215

name	(CDS detail)
type	STS
link
xref	UniSTS:158825
definition	standard_name : U74300

name	(CDS detail)
type	STS
link
xref	UniSTS:124910
definition	standard_name : L39770

name	(CDS detail)
type	STS
link
xref	UniSTS:195620
definition	standard_name : fd52b08.x1

name	(CDS detail)
type	STS
link
xref	UniSTS:195620
definition	standard_name : fd52b08.x1

name	(CDS detail)
type	STS
link
xref	UniSTS:207190
definition	standard_name : BB288505

name	(CDS detail)
type	STS
link
xref	UniSTS:128855
definition	standard_name : D1Mit488

name	(CDS detail)
type	STS
link
xref	UniSTS:123807
definition	standard_name : 27.MMHAP97FLA6.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:158826
definition	standard_name : AF000236

name	(CDS detail)
type	STS
link
xref	UniSTS:141360
definition	standard_name : Cmkor1

name	(CDS detail)
type	STS
link
xref	UniSTS:178433
definition	standard_name : AW541270

name	(CDS detail)
type	STS
link
xref	UniSTS:162533
definition	standard_name : RH125786

name	(CDS detail)
type	STS
link
xref	UniSTS:161511
definition	standard_name : RH124689

name	(CDS detail)
type	STS
link
xref	UniSTS:124423
definition	standard_name : RH118243

name	(CDS detail)
type	STS
link
xref	UniSTS:116255
definition	standard_name : D1Mit10

name	(CDS detail)
type	STS
link
xref	UniSTS:158827
definition	standard_name : AF064749

name	(CDS detail)
type	STS
link
xref	UniSTS:178436
definition	standard_name : AI507288

name	(CDS detail)
type	STS
link
xref	UniSTS:178439
definition	standard_name : AI042932

name	(CDS detail)
type	STS
link
xref	UniSTS:122678
definition	standard_name : 01.MMHAP90FLA1.seq

name	(CDS detail)
type	STS
link
xref	UniSTS:273360
definition	standard_name : PMC56945P1

name	(CDS detail)
type	STS
link
xref	UniSTS:142286
definition	standard_name : D1Wsu84e

name	(CDS detail)
type	STS
link
xref	UniSTS:185446
definition	standard_name : AW413472

name	(CDS detail)
type	STS
link
xref	UniSTS:234172
definition

name	(CDS detail)
type	STS
link
xref	UniSTS:158828
definition	standard_name : AU024550

name	(CDS detail)
type	STS
link
xref	UniSTS:213048
definition	standard_name : RH129755

name	LOC383542 (CDS detail)
type	misc_RNA
link	vega ensembl NCBI
xref	GI:149234186 GeneID:383542
definition	note : Derived by automated computational analysis using gene prediction method: GNOMON. Supporting evidence includes similarity to: 23 ESTs, 9 Proteins product : similar to Rpl7a protein pseudo : _no_value transcript_id : XR_031627.1

clone name	MSMg01-309G13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-267G22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-299K14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-359L10
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-429H19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-372J17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-342I13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-373L20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-439H01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-108P02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-293J24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-212O12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-293N06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-156A14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-172H23
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-180H06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-548O18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-047C14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-492F13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498E08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-420P07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-235K13
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-151H05
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-409K17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-356F02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-438C08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-487L05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-432C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-292A09
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-406N08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-344L21
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-362M22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-358H08
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-511L15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-408F15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-101M24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-176N19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-318C06
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-183B07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-392D15
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-122F17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-158O11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-500K11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-540O17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-498K07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-173A02
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-262A19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-307B14
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-140F17
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-269J17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-479D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-066O14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-494H17
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-288I19
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-545K22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-523I19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-321B19
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-368A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-462B20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-280F18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-099E12
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-405H18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-129N20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-129O20
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-438O01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450D07
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-528K14
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-266D20
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-450C24
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-128K18
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-414A05
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-382A07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-317P22
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-520H24
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-373H09
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-504F06
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-404B01
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-311D22
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-542G07
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-357K01
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-162I03
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-371A08
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-366A18
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-370H11
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-177B04
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-436J03
singlet/doublet	doublet
plural/unique	unique

clone name	MSMg01-440E23
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-418J11
singlet/doublet	singlet
plural/unique	unique

clone name	MSMg01-159L06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163B08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-123N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-242M04
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-135A03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133G10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220K15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-265B01
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-115C03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-335M02
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-047H07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311A15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-250D22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-130K03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-299M03
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-040K14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-301F12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-036P05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-124E21
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058O07
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-012H01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-158F03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-290G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-257M16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-133F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-162I09
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-149M08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-187E15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-306F08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-159L20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-106H20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-170B10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-064N04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-337O14
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099O08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061K16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-195C19
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-058E13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-059E22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-148B04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-232P18
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-260O10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164I20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-164J12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-160J22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-008B22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-201N23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025F14
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-303E03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256C13
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-235C12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-272K11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-035L03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-231F19
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-009C18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-268H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-316J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289A08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-289D11
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015O17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-099L22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-311E23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-142B02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-282G20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-302E17
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-085I08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-084E20
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-286G07
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-109I02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-100E21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-138J18
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-112I15
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-220O01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-168G22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-111N22
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-211I13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-089F13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-254O04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-179J10
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-154H03
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-163K12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-038A11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-054O12
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-028D02
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-182L08
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-218P01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-069C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-256C01
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-015D16
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-334C05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-098N13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-101K21
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-304J08
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-034C23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-090D13
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-330A17
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-025H23
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-026A15
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-041N05
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-240J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-217F06
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061J20
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-061O11
singlet/doublet	singlet
plural/unique	unique

clone name	B6Ng01-237G04
singlet/doublet	doublet
plural/unique	unique

clone name	B6Ng01-033H10
singlet/doublet	doublet
plural/unique	unique

BAC End Information

BAC end	BAC-end 1	BAC-end 2
end name	MSMg01-066O14.T7 (MSMg01no066_o14.b1)	MSMg01-066O14.TJ (MSMg01no066_o14.g1)
ACC	AG291773	AG291774
length	702	691
length of high quality (start - end)	472 (44 - 515)	249 (80 - 328)
definition	CHROMAT_FILE: MSMg01no066_o14.b1 PHD_FILE: MSMg01no066_o14.b1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:12:52 2005	CHROMAT_FILE: MSMg01no066_o14.g1 PHD_FILE: MSMg01no066_o14.g1.phd.1 CHEM: term DYE: big TIME: Tue May 17 17:12:52 2005
singlet/doublet	---	singlet
BLAST hit	no hit data	unique
sequence	CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCAAGAGAATCCGCGGA ATTCTCTTAATTGCCGATATCTGCATTCATTCATTGTGTATGTATGTGGG TGTAAGTGTGCCAGTGCTGTGGGTAGAGCTGGAAGACATCCAGCAGGAAG TTAGTTTTCTCCTTCTACTTTAAGCGTCTCAGGGTTTGAACTTGGGTCAC CAGGCTTGCTGGCAAGAGCTTTGCTGAGACCTCAGGCTGGCCCGCATAAT TTTCCTAATTTCCCCCTTCTGTTTTGAGAGAGGATCATGCTGGCTACCCT AGGCTGATATCGAACTTGCTATTCTGTGCCTCAATTTCCCAAGTGTAGGA TTACAGGCATGGACCACTGCGCCTCACTTCCTTTTTGCTTTTGAAAACCT CTGTACCTCATGGGCTTTGCACTCCCTCATAGTTCACTCTGTGTGTGTGT GTGTGTGTGTGTATACCTCATGGGCTTTGCACTCCCTCTCCCTCATAGTT CACTCTGTGTGTGCGCGTGTGTGTGTGTGTGTGTGCGTGTGTTTCTCCTC CAATTTTTTTGCTTTCTCTTTACCTTCCTTTCCATTTGTTTGTTTTTTGT ATGCTCTGTTTATCGTTCGTTTTTGCTTTTTTATACTCTTTCCTTATTCC TTTCTTTCCGTCCCCCTTCTTTTTCCCTCTCTCTTTTTACTCCCCGTTAT TT	TTCCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTCAGAAGCAGCTGCACTCAGC AGAGGAGAGGCAAACACGTGTGGGTTATTCGAGTAAGAAGCCCTTTGGCT TCTTCCTCTCGGCCATCACTTCCATGAAAAATAGATGAGGTTCAACAGGG GACATGAGAAGAGGCCGGGAAAGAACTCAAGATTCAGGCACCGTTCACTG AGGCCTCAGGGATAGGTGCATAGCCCATGTGAAACCACACGCTTTGATGG GGCTCGTCACAGTGAATCAAATTAATAGCGCCCAGCAACTTGGGGCTCTT GTGGTCTTCGATCCAGGTACTAGGGCTCAATGAAAGATAGATAGGCTCTT CAGCAAATATAGTATGTTGATTCCCTTTGCCTAGACCCATAAAGGGATCC AGAAAAAGCCATGAGCCCTTTTCATTCTCAGTGTACCCCACAAACTGCAA GGACAGAGTACTCTTCCCCTGATAGTGGCTTCTCATAAGCATGCTGGCCA CCAGTCGTACTTATTACTGCTCTTAGGATATCTTCTATCTCTAAAGTGCG ACCAAGCACCACCCATGATACGAATACGTGCTTAGATGTGGGAGAGCTCA CACCCAAGTATTTCCCCTGCAGTGCGTGTAACAGGAAGTGG
quality values	Open. Hide. 7 8 10 7 9 9 17 27 39 39 37 37 32 29 29 37 25 18 10 10 10 26 25 43 31 31 30 19 17 9 12 12 18 16 12 12 11 10 8 8 8 8 13 13 23 30 41 41 31 31 31 31 39 33 59 59 30 25 12 11 11 18 18 14 11 11 11 15 15 24 28 30 30 33 33 47 53 50 50 36 36 36 36 34 37 48 47 48 48 48 57 57 57 57 57 57 57 57 57 57 43 48 46 54 54 57 54 54 54 47 47 50 50 50 48 57 59 44 43 41 41 41 43 43 57 57 57 59 57 57 57 57 43 37 37 43 44 57 57 57 57 57 57 57 57 54 54 54 57 57 57 57 57 57 57 68 68 68 68 68 68 68 68 59 59 57 57 57 59 59 57 44 43 35 35 42 43 52 52 52 52 52 52 52 52 52 52 52 52 57 57 57 57 52 42 42 32 43 43 52 52 43 57 39 41 24 23 10 10 10 19 27 42 42 35 43 43 52 57 52 52 52 57 59 57 59 43 39 39 43 57 57 57 52 52 57 57 57 62 52 52 52 62 52 52 62 62 62 62 62 62 62 62 62 62 52 52 52 62 62 62 62 62 62 62 62 62 62 62 62 39 41 62 62 62 62 62 62 62 62 62 62 62 62 62 68 68 68 68 62 62 62 62 62 62 62 62 62 62 62 43 52 52 62 62 62 62 62 62 62 52 52 62 62 62 43 43 10 10 10 10 12 15 35 35 43 43 62 62 62 43 43 26 26 26 44 44 62 62 62 35 35 32 38 26 26 12 15 12 18 29 38 32 35 35 43 35 35 35 35 35 23 26 27 27 31 24 18 9 9 9 22 33 57 57 68 68 68 57 57 57 52 52 52 57 43 39 39 59 59 57 57 57 57 57 57 57 44 44 43 43 43 44 44 57 59 57 57 52 52 52 57 45 43 43 38 38 23 18 17 32 32 43 42 35 35 38 43 27 27 14 14 14 38 38 43 43 23 43 43 43 43 43 43 35 35 42 43 35 32 32 32 35 35 41 29 27 27 43 43 43 43 43 43 43 44 57 44 40 39 44 44 48 48 44 46 46 46 47 42 42 33 42 42 42 42 32 30 30 32 39 37 37 35 28 37 29 27 30 19 15 20 24 29 36 41 40 40 46 43 24 19 9 9 9 9 9 9 12 21 21 24 29 22 22 22 17 18 21 21 23 28 24 14 11 11 11 11 11 12 21 22 15 12 9 8 7 6 8 8 10 11 11 13 11 10 11 26 22 13 11 10 10 15 22 13 10 11 11 11 11 11 9 9 9 11 11 11 12 12 9 13 9 9 11 14 14 15 10 9 10 11 11 12 9 8 8 8 8 8 8 10 10 8 8 6 6 6 6 10 8 7 7 6 6 8 10 13 15 11 10 9 10 8 8 8 8 10 12 8 8 8 8 8 9 8 10 10 10 9 9 9 9 8 8 8 8 10 10 10 10 9 8 12 10 10 10 10 9 8 8 8 8 10 10 12 12 10 10 8 8 9 9 13 11 14 9 10 11 11 10 10 11 13 10 13 8 6 6 6 6 8 10 10 6 6 6 7 10 15 18 14	Open. Hide. 7 15 8 6 7 10 12 8 8 8 8 13 13 23 22 22 24 30 34 37 37 47 46 48 48 43 43 43 40 40 41 41 28 21 12 9 9 9 8 8 8 6 6 6 8 10 9 19 15 19 26 32 44 47 47 47 47 41 50 50 50 41 27 15 9 8 8 8 15 12 11 11 16 14 18 27 29 33 33 37 47 47 39 39 35 35 39 39 39 39 40 43 40 28 28 33 43 33 39 39 40 40 40 43 43 48 48 48 57 47 43 43 47 47 48 57 57 57 59 57 48 48 48 44 44 39 46 47 47 47 46 48 59 59 59 59 57 57 59 54 54 54 57 57 57 57 54 54 59 59 57 57 59 59 57 57 59 59 59 59 57 43 43 37 57 57 54 54 57 57 57 57 54 52 52 57 52 52 41 52 41 50 50 50 50 43 43 52 57 52 52 43 43 42 43 43 43 43 28 22 22 36 38 57 42 43 35 35 37 43 43 52 52 52 52 43 43 35 32 32 38 38 43 43 52 52 52 52 52 37 52 52 57 57 52 52 52 52 52 52 43 43 37 43 43 50 46 48 50 57 43 43 43 43 43 47 42 35 35 37 39 42 42 37 42 35 42 42 44 44 57 43 43 43 44 44 44 39 37 37 39 37 43 37 43 37 37 37 37 37 43 43 48 57 57 48 47 43 43 43 43 43 43 44 42 39 32 32 32 32 39 35 39 39 40 39 39 47 37 37 35 32 29 19 17 12 12 16 16 15 16 25 23 23 12 12 12 25 27 41 41 41 41 41 41 43 43 47 59 59 48 48 48 43 43 43 43 43 36 33 33 32 32 32 30 30 30 33 42 43 37 33 30 25 28 30 27 32 20 15 15 28 21 26 23 23 23 23 14 14 21 28 32 33 30 30 33 39 34 34 23 23 23 28 23 18 18 18 18 21 18 12 13 18 15 9 9 9 15 12 24 24 28 37 39 39 32 32 28 28 21 30 15 18 18 32 32 39 39 36 31 32 30 24 24 17 17 24 24 23 25 23 28 27 27 27 18 18 20 20 20 20 32 23 36 37 43 43 44 48 44 44 28 28 28 40 40 42 42 28 24 20 15 24 18 22 20 30 24 19 16 17 19 19 19 19 19 18 21 20 20 31 30 20 23 32 36 33 33 26 32 19 28 32 44 44 47 43 43 36 36 28 25 28 25 24 20 19 19 25 32 19 18 18 20 20 22 28 30 31 36 36 31 28 27 24 16 19 19 26 27 13 13 12 14 16 17 16 16 11 15 11 14 11 11 11 14 16 32 28 28 28 24 32 20 20 20 31 32 30 25 25 19 14 17 37 33 30 30 30 29 28 23 19 14 10 8 8 8 8 10 10 10 10 12 16 17 20 16 14 10 9 9 9 9 9 9 9 9 9 9 10 8 8 8 8 8 11 15 15 13 12 11 10 10 11 13 16 16 18 14 14 15 14 14 21 24 28 24 19 17 10 10 8 8 8 10 8 10 10 10 13 12 13 11 11 17 24 19 15 8 8 8 8 8 8 8 8 8 8 8 8 9 11 8 8 8 8 8 8 8

Alignment Information

BAC End 1

BAC End 2

Query= MSMg01no066_o14.g1 MSMg01no066_o14.g1 CHROMAT_FILE:
MSMg01no066_o14.g1 PHD_FILE: MSMg01no066_o14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:12:52 2005
         (249 letters)



>mm_chr1_92017015_92017661
          Length = 647

 Score =  398 bits (206), Expect = e-115
 Identities = 236/250 (94%), Gaps = 10/250 (4%)
 Strand = Plus / Minus

                                                                       
Query: 1   tcagaagcagctgcactcagcagaggagaggcaaacacgtgtgggttattcgagtaagaa 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 tcagaagcagctgcactcagcagaggagaggcaaacacgtgtgggttattcgagtaagaa 385

                                                                       
Query: 61  gcc---ctttggct-tcttcctctcggccatcacttccatgaaaaatagatgaggttcaa 116
           |||        | | ||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 384 gccaaa-----g-tatcttcctcttggccatcacttccatgaaaaatagatgaggttcaa 331

                                                                       
Query: 117 caggggacatgagaagaggccgggaaagaactcaagattcaggcaccgttcactgaggcc 176
           |||||||||||||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 330 caggggacatgagaagaggccgggaaagaactcaagattcgggcaccgttcactgaggcc 271

                                                                       
Query: 177 tcagggataggtgcatagcccatgtgaaaccacacgctttgatggggctcgtcacagtga 236
           |||||||||||||||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 270 tcagggataggtgcatagcccatgtgaaaccacatgctttgatggggctcgtcacagtga 211

                     
Query: 237 atcaaattaa 246
           || |||||||
Sbjct: 210 attaaattaa 201


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 647
Length adjustment: 9
Effective length of query: 240
Effective length of database: 638
Effective search space:   153120
Effective search space used:   153120
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)

BAC Information

Search Parameter

Search Result

BAC

BAC End Information

Alignment Information