Query= MSMg01no067_m19.b1 MSMg01no067_m19.b1 CHROMAT_FILE:
MSMg01no067_m19.b1 PHD_FILE: MSMg01no067_m19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:14:00 2005
(322 letters)
>mm_chr1_101943733_101944454
Length = 722
Score = 561 bits (290), Expect = e-164
Identities = 308/314 (98%)
Strand = Plus / Plus
Query: 6 ggaattcatcactaacatgacaaaaacagaccaaaatcttgaactcagagagctccctgt 65
||||||||||||||||| ||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 206 ggaattcatcactaacaagacaaaaacagacaaaaatcttgaactcagagagctccctgt 265
Query: 66 tttgagtttccttttttcttttcataaaatgtaatattttacattcttgatagtcatcaa 125
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 tttgagtttcctttttttttttcataaaatgtaatattttacattcttgatagtcatcaa 325
Query: 126 aagcaggccaattccttgcacataatttcttcatttccattatctgaaatcctgatgcaa 185
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 aagcaggccaattccttgcacataatttcttcatttccattatctgaaatcctgatgcaa 385
Query: 186 acccattttatcacatattccagaaaaatagtctagaacttggaagctggagtcaggtat 245
||||||||||||||||||||||||| |||||||||||||||||||||||||||| |||||
Sbjct: 386 acccattttatcacatattccagaagaatagtctagaacttggaagctggagtcgggtat 445
Query: 246 tcatttcagctttaaatctgtgctttgcatgttaattaccgcctcctattttaaatttat 305
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 446 tcatttcagctttaaatctgtgttttgcatgttaattaccgcctcctattttaaatttat 505
Query: 306 cttatcaaaaacga 319
||||||||||||||
Sbjct: 506 cttatcaaaaacga 519
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 14
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 322
Length of database: 722
Length adjustment: 9
Effective length of query: 313
Effective length of database: 713
Effective search space: 223169
Effective search space used: 223169
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no067_m19.g1 MSMg01no067_m19.g1 CHROMAT_FILE:
MSMg01no067_m19.g1 PHD_FILE: MSMg01no067_m19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:14:00 2005
(291 letters)
>mm_chr1_102092344_102093033
Length = 690
Score = 468 bits (242), Expect = e-136
Identities = 278/290 (95%), Gaps = 1/290 (0%)
Strand = Plus / Minus
Query: 1 aaaacaaacatttcaatagtcatcaaaaggcaagctgattaatataagcagcctaatgag 60
|||||||||||||||||||||||||||| |||||||||||||||||||||| |||||||
Sbjct: 489 aaaacaaacatttcaatagtcatcaaaaagcaagctgattaatataagcagtttaatgag 430
Query: 61 gctcatacattagtaattagctatgttaccttcatttacctgttgctttactgaaccacc 120
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 429 gctcatacattagaaattagctatgttaccttcatttacctgttgctttactgaaccacc 370
Query: 121 cactgtgttgatcttggttaggtcagacagctttttcacagaagctttttaaacccattt 180
|||||||||||||||||||| |||||||||||||||||||||| |||||||||||||||
Sbjct: 369 aactgtgttgatcttggttagctcagacagctttttcacagaag-tttttaaacccattt 311
Query: 181 ctatctagacagtctactaattatcataatctcattggattctcacagttgggtcttcaa 240
|||||| ||||||||||||||||||||||||||||||| |||||||||||||| |||||
Sbjct: 310 ctatctctacagtctactaattatcataatctcattggactctcacagttgggttttcaa 251
Query: 241 gataattgaaacatgttctgattaaagcagatgctgacattaaagaatta 290
|||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 250 gataattgaaacgtgttctgattaaagcagatgctgacattaaagaatta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 690
Length adjustment: 9
Effective length of query: 282
Effective length of database: 681
Effective search space: 192042
Effective search space used: 192042
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
