Query= MSMg01no068_b20.b1 MSMg01no068_b20.b1 CHROMAT_FILE:
MSMg01no068_b20.b1 PHD_FILE: MSMg01no068_b20.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:14:26 2005
(207 letters)
>mm_chr1_182773814_182774421
Length = 608
Score = 356 bits (184), Expect = e-103
Identities = 199/204 (97%), Gaps = 2/204 (0%)
Strand = Plus / Minus
Query: 4 ggaattctctatgtagaccacggctggcctcaaactgggaataaagggtgtgctccacca 63
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 447 ggaattctctatgtagacca-ggctggcctcaaactgggaataaagggtgtgctccacca 389
Query: 64 ca-ctggcatccttagaggccctatgttttgtctttggtatctcacgtaaggacttaata 122
|| |||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 388 cacctggcatccttagaggttctatgttttgtctttggtatctcacgtaaggacttaata 329
Query: 123 gtccatttgcttctctagtttgaggtaaagattcaactttggagggataggagtgggttt 182
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 gtccatttgcttctctagtttgaggtaaagattcaactttggagggataggagtgggttt 269
Query: 183 gctgctgtctttttttgtttgttt 206
|||||||||||||||| |||||||
Sbjct: 268 gctgctgtctttttttttttgttt 245
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 207
Length of database: 608
Length adjustment: 9
Effective length of query: 198
Effective length of database: 599
Effective search space: 118602
Effective search space used: 118602
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no068_b20.g1 MSMg01no068_b20.g1 CHROMAT_FILE:
MSMg01no068_b20.g1 PHD_FILE: MSMg01no068_b20.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:14:26 2005
(279 letters)
>mm_chr1_182618235_182618913
Length = 679
Score = 462 bits (239), Expect = e-135
Identities = 269/279 (96%)
Strand = Plus / Plus
Query: 1 atctctcacagattcattaaatgacataaaaaacacaatagatgcttctcctatcaggta 60
||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 201 atctctcacagattcattaaatgacataaaaaacacaatagatgcttctaatatcaggta 260
Query: 61 agtcataggtatgtgatgatgtgtaagaattctgcttatttgtacagtatttgtgtattt 120
||||||||||||||||||| ||||| ||||||||||||||||||||||||||||||||||
Sbjct: 261 agtcataggtatgtgatgacgtgtaggaattctgcttatttgtacagtatttgtgtattt 320
Query: 121 tatttatcctttaaatctatttagacaagcttttcacttctagtcatcctattgacggaa 180
| |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 321 tgtttatcctttaaatctatttagacaagcttttcacttctagtcatcctgttgacggaa 380
Query: 181 cagatgtgttacataagctctgcatgaaggcgtcaggacataagctctgggtttggttta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cagatgtgttacataagctctgcatgaaggcgtcaggacataagctctgggtttggttta 440
Query: 241 ctgcatattattgaccctttcagtaccttcagtgccctg 279
||||| | | ||||||||||||||||||||||||||||
Sbjct: 441 ctgcagagcagtgaccctttcagtaccttcagtgccctg 479
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 13
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 279
Length of database: 679
Length adjustment: 9
Effective length of query: 270
Effective length of database: 670
Effective search space: 180900
Effective search space used: 180900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
