Query= MSMg01no069_g02.b1 MSMg01no069_g02.b1 CHROMAT_FILE:
MSMg01no069_g02.b1 PHD_FILE: MSMg01no069_g02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:16:07 2005
(314 letters)
>mm_chr1_56581838_56582550
Length = 713
Score = 514 bits (266), Expect = e-150
Identities = 301/314 (95%), Gaps = 5/314 (1%)
Strand = Plus / Plus
Query: 5 gaattccacggggtacccgtttattgatatagttcattcacaaagcaaagacatagtcta 64
|||||||| |||||| |||||||||||||||||||||||||||||||| |||||||||
Sbjct: 205 gaattccatggggtaaatgtttattgatatagttcattcacaaagcaaaggcatagtcta 264
Query: 65 taactaatgcataccactagactctgaaaaagatcttgagatctacaacttcatgagatt 124
||||||||||||| || |||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 265 taactaatgcatagca-tagactctgaaaaagatcttgaaatctacaacttcatgagatt 323
Query: 125 aaataaatgtcaagtgttaacagtatgagtaaaagtggaagagtagaagaaaatggaaca 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 aaataaatgtcaagtgttaacagtatgagtaaaagtggaagagtagaagaaaatggaaca 383
Query: 185 cctacctcagactgtatctgacagtctcaaatagggggagacaaactgagagaataaata 244
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 384 cctacctcagactgtatctgacagtcacaaatagggggagacaaactgagagaataaata 443
Query: 245 atcagaggaattaaataaa-a---atatatatatataaagaaatctctgaaaaataatgt 300
||||||||||||||||||| | ||||||||||||||||||||||||||||||||||||
Sbjct: 444 atcagaggaattaaataaatatatatatatatatataaagaaatctctgaaaaataatgt 503
Query: 301 caggtaatgtcttg 314
||||||||||||||
Sbjct: 504 caggtaatgtcttg 517
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 314
Length of database: 713
Length adjustment: 9
Effective length of query: 305
Effective length of database: 704
Effective search space: 214720
Effective search space used: 214720
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no069_g02.g1 MSMg01no069_g02.g1 CHROMAT_FILE:
MSMg01no069_g02.g1 PHD_FILE: MSMg01no069_g02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:16:07 2005
(104 letters)
>mm_chr1_56723762_56724265
Length = 504
Score = 194 bits (100), Expect = 2e-54
Identities = 103/104 (99%)
Strand = Plus / Minus
Query: 1 ccatctttgtctctgcttggcttatctgaaacagctgtttttactcactgtccttaaaga 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 304 ccatctttgtctctgcttggcttatctgaaacagctgtttttactcactgtccttaaaga 245
Query: 61 cctagagaatctttaatacaaagtgaaaactttggaaggtttgt 104
|||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 244 cctagagaatctttaatagaaagtgaaaactttggaaggtttgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 104
Length of database: 504
Length adjustment: 8
Effective length of query: 96
Effective length of database: 496
Effective search space: 47616
Effective search space used: 47616
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
|
