Query= MSMg01no070_h13.b1 MSMg01no070_h13.b1 CHROMAT_FILE:
MSMg01no070_h13.b1 PHD_FILE: MSMg01no070_h13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:17:33 2005
(535 letters)
>mm_chr1_176652119_176653053
Length = 935
Score = 1035 bits (535), Expect = 0.0
Identities = 535/535 (100%)
Strand = Plus / Plus
Query: 1 ataagactgaggccaaatagtactcacaaggccgggtctgtcctctctgtactcgactat 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ataagactgaggccaaatagtactcacaaggccgggtctgtcctctctgtactcgactat 260
Query: 61 gcctttcatagcttgttcaagtgtcactggccatgacttacaaagaatgagccatggctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcctttcatagcttgttcaagtgtcactggccatgacttacaaagaatgagccatggctc 320
Query: 121 catttaaccagcataagcccaacttcccttcgatggaaaactactgctttaaagatcatc 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 catttaaccagcataagcccaacttcccttcgatggaaaactactgctttaaagatcatc 380
Query: 181 atgtagactgaaagagcactgttgcgattcctgaaccaacacgattatcactctcacatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 atgtagactgaaagagcactgttgcgattcctgaaccaacacgattatcactctcacatt 440
Query: 241 caactctatatgaacaaaggtagaaatctcattcattcctaaagtgttcttcctccaaaa 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 caactctatatgaacaaaggtagaaatctcattcattcctaaagtgttcttcctccaaaa 500
Query: 301 taatagtcttgtggttaggtgtcacaggactctttttttttttcccaagacagggtttct 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 taatagtcttgtggttaggtgtcacaggactctttttttttttcccaagacagggtttct 560
Query: 361 ctgtatagccctggctgtcctggaactcactttgtagatcaggctggacagaactcagaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ctgtatagccctggctgtcctggaactcactttgtagatcaggctggacagaactcagaa 620
Query: 421 atccacctgcctctgcctcccgagtgctgggattaaaggcgtccgccaccacgcctggct 480
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atccacctgcctctgcctcccgagtgctgggattaaaggcgtccgccaccacgcctggct 680
Query: 481 agaactcttgagtctcattccacaagtgatgaaaaagctgagctctgtttcttcc 535
|||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 agaactcttgagtctcattccacaagtgatgaaaaagctgagctctgtttcttcc 735
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 535
Length of database: 935
Length adjustment: 10
Effective length of query: 525
Effective length of database: 925
Effective search space: 485625
Effective search space used: 485625
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no070_h13.g1 MSMg01no070_h13.g1 CHROMAT_FILE:
MSMg01no070_h13.g1 PHD_FILE: MSMg01no070_h13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:17:33 2005
(422 letters)
>mm_chr1_176829381_176830200
Length = 820
Score = 801 bits (414), Expect = 0.0
Identities = 420/422 (99%), Gaps = 2/422 (0%)
Strand = Plus / Minus
Query: 1 atcctgtaaccctagctgactttactcttatgagcttcagacaattgagtagctgaagtc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 atcctgtaaccctagctgactttactcttatgagcttcagacaattgagtagctgaagtc 561
Query: 61 acaggcactcatgacagggtctggctaagaatttggagtcctgctatttctttgctcaaa 120
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 560 acaggcactcatgacagggtctggctaagaatttggagtcct-ctatttctttgctcaaa 502
Query: 121 gtatcctcaagaggagatgggtaaagaactaaacccaacacttctgaacttgaccttatt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 gtatcctcaagaggagatgggtaaagaactaaacccaacacttctgaacttgaccttatt 442
Query: 181 tgtaggaacagaaatgaaggtctttcaactctcattgaaggagctaacagaggtacaaaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tgtaggaacagaaatgaaggtctttcaactctcattgaaggagctaacagaggtacaaaa 382
Query: 241 gggaacacttgattgatctgctttctgcagtatgtgcatatttgtggtttgggtttgtgg 300
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ggg-acacttgattgatctgctttctgcagtatgtgcatatttgtggtttgggtttgtgg 323
Query: 301 gagtgtggctgggagctggcttcatttctctattcctaggaactacctttcttacctccc 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 322 gagtgtggctgggagctggcttcatttctctattcctaggaactacctttcttacctccc 263
Query: 361 aacaccaggtcccagagctccacccggggtatgcttctgcactcaactcactaaacattt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 aacaccaggtcccagagctccacccggggtatgcttctgcactcaactcactaaacattt 203
Query: 421 aa 422
||
Sbjct: 202 aa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 820
Length adjustment: 9
Effective length of query: 413
Effective length of database: 811
Effective search space: 334943
Effective search space used: 334943
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
