Query= MSMg01no071_b06.b1 MSMg01no071_b06.b1 CHROMAT_FILE:
MSMg01no071_b06.b1 PHD_FILE: MSMg01no071_b06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:18:21 2005
(408 letters)
>mm_chr1_182565491_182566298
Length = 808
Score = 708 bits (366), Expect = 0.0
Identities = 382/388 (98%), Gaps = 2/388 (0%)
Strand = Plus / Minus
Query: 4 ggaattctcaaccttcctaatgcttcgactctttagtacagttccttgggttgtgactcc 63
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 801 ggaattctcaaccttcctaatgcttcgactctttagtacagttccttgggttgtgactct 742
Query: 64 ccaaccgtaaaattattttcatcactacttcgtaactaatttcgttactgttatgaatca 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 741 ccaaccgtaaaattattttcatcactacttcgtaactaatttcgttactgttatgaatca 682
Query: 124 tgatgtaaatatctgtgttttctgatggtcttaggtgatcgtgtgaaagggccattcagc 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tgatgtaaatatctgtgttttctgatggtcttaggtgatcgtgtgaaagggccattcagc 622
Query: 184 ccttgaggggttgagacccacaggttgagaacctctgctatattgcagtcttgaagatca 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 ccttgaggggttgagacccacaggttgagaacctctgctatattgcagtcttgaagatca 562
Query: 244 agcctttaacaagtggaccttccggaaatatttgagatccagtggaacagacctttgtat 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 agcctttaacaagtggaccttccggaaatatttgagatccagtggaacagacctttgtat 502
Query: 304 caaatttcctctctgaaccaaagataataggccatatagatgctctgctgggccttgtgt 363
|||||||||||||||||||||||||||||||||| | |||||||||||||||||||||||
Sbjct: 501 caaatttcctctctgaaccaaagataataggccaaagagatgctctgctgggccttgtgt 442
Query: 364 gttggcaggctgacattaaacgatgctc 391
|||||||||||||||| |||| |||||
Sbjct: 441 gttggcaggctgacatcaaac--tgctc 416
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 408
Length of database: 808
Length adjustment: 9
Effective length of query: 399
Effective length of database: 799
Effective search space: 318801
Effective search space used: 318801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no071_b06.g1 MSMg01no071_b06.g1 CHROMAT_FILE:
MSMg01no071_b06.g1 PHD_FILE: MSMg01no071_b06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:18:22 2005
(242 letters)
>mm_chr1_182407336_182407975
Length = 640
Score = 375 bits (194), Expect = e-108
Identities = 230/242 (95%), Gaps = 2/242 (0%)
Strand = Plus / Plus
Query: 1 tcctgtgccggcctcctgagtgaagaagggattgcaggtataaaccacaacaccgagcca 60
||||||||| |||||||||||||||||||||||||||||||||||||| | || ||||||
Sbjct: 201 tcctgtgccagcctcctgagtgaagaagggattgcaggtataaaccacgatactgagcca 260
Query: 61 actaattaccttcgtttctcttgtttgcagtattttcccccattagaatcttaatttttt 120
|||||||||||||||||||||||||||||||||||| ||||||||||||||||| |||||
Sbjct: 261 actaattaccttcgtttctcttgtttgcagtatttttccccattagaatcttaaattttt 320
Query: 121 tttgtgctttcccagtaatagtctctaccgtgtggaatgttgtggttttcatgtcaccct 180
|| |||||||| |||||||||||||||||||||| ||||||||||||| |||||||||||
Sbjct: 321 tt-gtgctttctcagtaatagtctctaccgtgtgaaatgttgtggttt-catgtcaccct 378
Query: 181 cagagacctctttaatggggctctctacccgtcctattctaatgaatactggttgtcttc 240
|||||||||||||||||||||||||||||| ||||||||||||||||||||| |||||||
Sbjct: 379 cagagacctctttaatggggctctctacccttcctattctaatgaatactggctgtcttc 438
Query: 241 ca 242
||
Sbjct: 439 ca 440
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 242
Length of database: 640
Length adjustment: 9
Effective length of query: 233
Effective length of database: 631
Effective search space: 147023
Effective search space used: 147023
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
