GTATGATCTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
CGCGGAATTCCATGGTTCAGCCTCCAATGAGACTACTAGTAAGCACCACT
AGAAAGGCTTAAAATTGTTTCTCAGACCAAAACAGTTAATTTATGACAGA
ATATGAAGACTAGAAGTCAGTTTTGACACCGAGTTTTGCTTATTTCAGTT
CACTAGGCTACTTACTATCTGAATGCCAGACATTTTTGGCTTCATGTCAA
GAATTTATAATAGCTTTTACTAGAGTTTTGCAAGTTATATTCTTTAAACT
GTACCCGGTTCTATGGCCTAATTAACCTTTAGCAATACTGCAGTTCTCAG
GTTATAGAGGAAATCTTCATGTATCAGGGATCAAGTAGGATGGGCTTTTA
AAGGTCAGAGCATTATCATGAGTGCGGAGATTGTGACTTGATGACTAGGA
AGTGAAGGAGCCAAGAGCAATCTCTAAGAAGCCAGATTCAAACTCATGTT
TATTCATACGTCTTAACATTGACTTTGGTAAATATGTGTCTGCAGGATTT
TCAAATTAGTGACTATTAGTTGGGGGGAGTATTTCATAAACAATTAAAAT
TTAAATATTATTTAAAAATATGTAGAAAGTTCCAGCCAAGTACCTTTGGA
ATTTAAGTGATTATCTTAAGCATAATCAGTATTTCCCTCATGAATATTTC
CTGAAAGA

NTTTTTTCGATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTGTTTAGTTCTGCACCCCA
TTTTTAATAGGGTTATTTGGTTTTCTGCAGTCCAATCTCTTCGGTTCTTT
ATATATATTGAATATTAGCCCCCCCTATCACATTTAGGATTGGTAAAGGT
GTTTTGCCAATCTGTCGGTTGCCTTTTGGTCATACTGACAGTGCTTTTTG
CCTTACAGAAACTTTGAAATTTTATGAGGTCCCATTTTTTGATTCTTGAT
CTTTCAGGCCTTGCCATTGGTGTTTGGTTCAGGAATTTTTCCCCTGTGCC
CATATCTTCAAGGCTCTTCCCCACTTATACTCTATAAGTTTCAGTCTCTC
TGATTTTGTTAATTGGTATACTGTCCCTGTGCCCTCTAGTTAGTCTGGCT
AGGGAAATTATCTATCCTATTGATTTTCTCAAAGACCCAGCTCCTGGTTT
GGTTGATTCTTTGAATAGTTCTTTTCGTTNTTACTTGGTTTATTTCAGCT
TTGAGTTTGATTATTTCCTGCAATGTACTCCTACTTGGTGAATTTGCTGC
CTATTGTTCTAGAGCTTTCAGGTGTGCTGTCAAGCTGCTAGTGTATGCTC
TCTGCAGCTTCTTTTTGGAGGCACTCAAT

Query= MSMg01no071_g19.b1 MSMg01no071_g19.b1 CHROMAT_FILE:
MSMg01no071_g19.b1 PHD_FILE: MSMg01no071_g19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:18:49 2005
         (510 letters)



>mm_chr1_80809317_80810226
          Length = 910

 Score =  963 bits (498), Expect = 0.0
 Identities = 507/510 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   aatgagactactagtaagcaccactagaaaggcttaaaattgtttctcagaccaaaacag 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aatgagactactagtaagcaccactagaaaggcttaaaattgtttctcagaccaaaacag 260

                                                                       
Query: 61  ttaatttatgacagaatatgaagactagaagtcagttttgacaccgagttttgcttattt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttaatttatgacagaatatgaagactagaagtcagttttgacaccgagttttgcttattt 320

                                                                       
Query: 121 cagttcactaggctacttactatctgaatgccagacatttttggcttcatgtcaagaatt 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cagttcactaggctacttactatctgaatgccagacatttttggcttcatgtcaagaatt 380

                                                                       
Query: 181 tataatagcttttactagagttttgcaagttatattctttaaactgtacccggttctatg 240
           ||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 381 tataatagcttttactagagttttgcaagttatattccttaaactgtacccggttctatg 440

                                                                       
Query: 241 gcctaattaacctttagcaatactgcagttctcaggttatagaggaaatcttcatgtatc 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gcctaattaacctttagcaatactgcagttctcaggttatagaggaaatcttcatgtatc 500

                                                                       
Query: 301 agggatcaagtaggatgggcttttaaaggtcagagcattatcatgagtgcggagattgtg 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agggatcaagtaggatgggcttttaaaggtcagagcattatcatgagtgcggagattgtg 560

                                                                       
Query: 361 acttgatgactaggaagtgaaggagccaagagcaatctctaagaagccagattcaaactc 420
           ||||||||||||||||||||||||||||||||||||||| ||||||||||||||||||||
Sbjct: 561 acttgatgactaggaagtgaaggagccaagagcaatctcaaagaagccagattcaaactc 620

                                                                       
Query: 421 atgtttattcatacgtcttaacattgactttggtaaatatgtgtctgcaggattttcaaa 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atgtttattcatacgtcttaacattgactttggtaaatatgtgtctgcaggattttcaaa 680

                                         
Query: 481 ttagtgactattagttggggggagtatttc 510
           ||||||||||| ||||||||||||||||||
Sbjct: 681 ttagtgactatcagttggggggagtatttc 710


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 24
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 510
Length of database: 910
Length adjustment: 10
Effective length of query: 500
Effective length of database: 900
Effective search space:   450000
Effective search space used:   450000
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)