Query= MSMg01no073_m03.b1 MSMg01no073_m03.b1 CHROMAT_FILE:
MSMg01no073_m03.b1 PHD_FILE: MSMg01no073_m03.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:21:55 2005
(658 letters)
>mm_chr1_81580244_81581301
Length = 1058
Score = 1210 bits (626), Expect = 0.0
Identities = 647/654 (98%)
Strand = Plus / Plus
Query: 5 gaattcagtagaatctcaaactagggatgcattttaaaagaaaggggtaactgatctaaa 64
|||||||||| |||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcagtaaaatctcaaactagggatgcattttaaaagaaaggggtaactgatctaaa 264
Query: 65 atgcaggttttgatacaacattttttaaagtaagaaattgggacttcactaacgttgtga 124
||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 atgcaggttttgatagaacattttttaaagtaagaaattgggacttcactaacgttgtga 324
Query: 125 aaagaaagcaatggtgaagatcgcatggccgcttggattctgtgtgtcttaagtcagaca 184
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 325 aaagaaagcaatggtgaagatcacatggccgcttggattctgtgtgtcttaagtcagaca 384
Query: 185 ttgcctcaaaattggttcttaatttctacactaatataaagtaaaaagaaaaaaaaacca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttgcctcaaaattggttcttaatttctacactaatataaagtaaaaagaaaaaaaaacca 444
Query: 245 gaaatgttatggatgattattcaggctattattggtcacttatccatacgtctccaaaaa 304
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||| ||
Sbjct: 445 gaaatgttatggatgattattcaggctattattggtcacttatccataagtctccaagaa 504
Query: 305 ataaaatctgattttagaattatttaaaatattagctaaaatgtatataaatgtataaac 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 ataaaatctgattttagaattatttaaaatattagctaaaatgtatataaatgtataaac 564
Query: 365 tctaacaatcacatgaaattactattaaaacaaagaaaagttgatccacaggaataagaa 424
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 565 tctaacaatcacatgaaattactattaaaacaaagaaaagttgatccacaggaataagaa 624
Query: 425 cacctcacacctgactcttgggcattatcacaggtcacagatggaatatgtcaaggagta 484
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 cacctcacatctgactcttgggcattatcacaggtcacagatggaatatgtcaaggagta 684
Query: 485 gacgatgccccattctcccctgtattcttcttctgttaccaagggtgcccaagcctttgg 544
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 685 gacgatgccccattctcccctgtattcttcttctgttaccaagggtgtccaagcctttgg 744
Query: 545 agccctccagcccataacttcttcctgagcatcatgaggaggatgagggatgttgggatg 604
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 745 agccctccagcccataacttcttcctgagcatcatgaggaggatgagggatgttgggatg 804
Query: 605 ttggtcagtggtgctgatatttgtcttttcttggaagttcatccataaaaggag 658
||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 ttggtcagtggtgctgatatttgtcttttcttggaagttcatccataaaaggag 858
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 31
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 658
Length of database: 1058
Length adjustment: 10
Effective length of query: 648
Effective length of database: 1048
Effective search space: 679104
Effective search space used: 679104
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no073_m03.g1 MSMg01no073_m03.g1 CHROMAT_FILE:
MSMg01no073_m03.g1 PHD_FILE: MSMg01no073_m03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:21:55 2005
(615 letters)
>mm_chr1_81742173_81743187
Length = 1015
Score = 830 bits (429), Expect = 0.0
Identities = 447/453 (98%), Gaps = 1/453 (0%)
Strand = Plus / Minus
Query: 164 agaatgcctcatctgcatatggtgacgcttgggtgctacccctatgtgactgactgc-ga 222
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 1015 agaatgcctcatctgcatatggtgacgcttgggtgctacccctatgtgactgactgcgga 956
Query: 223 agatcctctccacagggtgccagtggtcacatgaaagggacctggtgaggagtaggtgaa 282
||||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 955 agatcctctccacggggtgccagtggtcacatgaaagggacctggtgaggagtaggtgaa 896
Query: 283 atgcctaccatcctcaggtctcagggtcctagggtttctgaatccactcaacctgcaagt 342
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 895 atgcctaccatcctcaggtctcagggtcctagggtttctgaatccactcaacctgcaagt 836
Query: 343 ttcctggcatggcctactggcccataggtgtgtttccatggtttcttatgatggtagagg 402
||||||||||||||||||| ||||||||||||||||||||||||||| |||||||||||
Sbjct: 835 ttcctggcatggcctactgacccataggtgtgtttccatggtttcttgggatggtagagg 776
Query: 403 agggaggatacagatgtgagaaacatgaataaatatgcatttaatagtataaagaatctg 462
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 775 agggaggatacagatgtgagaaacatgaataaatatgcatttaatagtataaagaatctg 716
Query: 463 tattcatgtgtgtgcacatgtgcctgggagggggaggattacaattattatattttctca 522
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 tattcatgtgtgtgcacatgtgcctgggagggggaggattacaattattatattttctcg 656
Query: 523 tggtttacacaggaagcaaactgaaacatgaatccactatgctagagtcatggtcatgtg 582
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 tggtttacacaggaagcaaactgaaacatgaatccactatgctagagtcatggtcatgtg 596
Query: 583 ctttcatgagcatttccctgccattaatgcctt 615
|||||||||||||||||||||||||||||||||
Sbjct: 595 ctttcatgagcatttccctgccattaatgcctt 563
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 615
Length of database: 1015
Length adjustment: 10
Effective length of query: 605
Effective length of database: 1005
Effective search space: 608025
Effective search space used: 608025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
