Query= MSMg01no075_h17.b1 MSMg01no075_h17.b1 CHROMAT_FILE:
MSMg01no075_h17.b1 PHD_FILE: MSMg01no075_h17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:24:09 2005
(371 letters)
>mm_chr1_41441609_41442379
Length = 771
Score = 694 bits (359), Expect = 0.0
Identities = 365/367 (99%)
Strand = Plus / Minus
Query: 5 gaattcattcagcccacttatttaagataatcatttatttttctgagacttactttttaa 64
|||||||||||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 571 gaattcattcagcccatttatttaagataatcatttatttttctgagacttactttttaa 512
Query: 65 ccatttaggtcagtcatttaaaaaaattaaaagccaagttctgcatttcagatggtgagg 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 ccatttaggtcagtcatttaaaaaaattaaaagccaagttctgcatttcagatggtgagg 452
Query: 125 acggaagtttaaatttcgtttgacttgcttaactgtaacacaccttaaagggctttgccc 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 451 acggaagtttaaatttcgtttgacttgcttaactgtaacacaccttaaagggctttgccc 392
Query: 185 aggagcaaattgtctcaagacactctaggggactgtgaggcagatgccttgggaatcatg 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 aggagcaaattgtctcaagacactctaggggactgtgaggcagatgccttgggaatcatg 332
Query: 245 agatgaagtgacttcaatatagaactggatggagaacaatggacaagcagagtatgctac 304
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 331 agatgaagtgacttcaatatagaacgggatggagaacaatggacaagcagagtatgctac 272
Query: 305 agacaagggcttggggttaacagtgttctgccaatctgagagccaggtcaggccagagag 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 271 agacaagggcttggggttaacagtgttctgccaatctgagagccaggtcaggccagagag 212
Query: 365 aagcctg 371
|||||||
Sbjct: 211 aagcctg 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 17
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 371
Length of database: 771
Length adjustment: 9
Effective length of query: 362
Effective length of database: 762
Effective search space: 275844
Effective search space used: 275844
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no075_h17.g1 MSMg01no075_h17.g1 CHROMAT_FILE:
MSMg01no075_h17.g1 PHD_FILE: MSMg01no075_h17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:24:09 2005
(337 letters)
>mm_chr1_41335300_41336036
Length = 737
Score = 586 bits (303), Expect = e-172
Identities = 330/341 (96%), Gaps = 4/341 (1%)
Strand = Plus / Plus
Query: 1 tcagaatcctatgcaaaacaatgaaattaagtcattaaaaaaaaactacttatctaaggc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tcagaatcctatgcaaaacaatgaaattaagtcattaaaaaaaaactacttatctaaggc 260
Query: 61 ccattttttaagcttctgcatttagaggaaacagagctaatagcaccctcagacccagtg 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ccattttttaagcttctgcatttagaggaaacagagctaatagcaccctcagacccagtg 320
Query: 121 cctttgaactgtgaaccctaagagaggaagttgctttgcctaactctgaactgtttgctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 cctttgaactgtgaaccctaagagaggaagttgctttgcctaactctgaactgtttgctt 380
Query: 181 agatgaattttcagcaaatccctttctcctgggttctcattctctctctctctctctctc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 agatgaattttcagcaaatccctttctcctgggttctcattctctctctctctctctctc 440
Query: 241 tctctctctctctctctctctctctctctctcacacacacacacacacacac----gcac 296
|||||||||||||||||| | | | | | | ||||||||||||||||||||| ||||
Sbjct: 441 tctctctctctctctctcacacacacacacacacacacacacacacacacacacacgcac 500
Query: 297 acactcacacacttacacacacatacacactcatatacaca 337
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 acactcacacacttacacacacatacacactcatatacaca 541
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 88
Number of extensions: 19
Number of successful extensions: 19
Number of sequences better than 10.0: 1
Number of HSP's gapped: 12
Number of HSP's successfully gapped: 1
Length of query: 337
Length of database: 737
Length adjustment: 9
Effective length of query: 328
Effective length of database: 728
Effective search space: 238784
Effective search space used: 238784
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
