Query= MSMg01no078_c15.b1 MSMg01no078_c15.b1 CHROMAT_FILE:
MSMg01no078_c15.b1 PHD_FILE: MSMg01no078_c15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:24 2005
(226 letters)
>mm_chr1_59988996_59989623
Length = 628
Score = 368 bits (190), Expect = e-106
Identities = 205/210 (97%), Gaps = 2/210 (0%)
Strand = Plus / Plus
Query: 5 gaattctatcctgtcctgaa-tttcttctgcctaacatacaacaaaatataaaatgaaaa 63
||||||||||||||| |||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctatcctgtcttgaaatttcttctgcctaacatacaacaaaatataaaatgaaaa 264
Query: 64 taaacatacagtttatctagggctaaacaagtaccctataatttccaacatctatgtggg 123
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 265 taaacatacagtttatctagggctaaacaagtaccctataatttccaacatctatggggg 324
Query: 124 gggg-actcttagaatatgtcacctgaagataaagaagggtatactgtaagtttggatag 182
|||| |||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gggggactcttagaatatgtcacctgaagataaagaagggtatactgtaagtttggatag 384
Query: 183 tgatttgtacatgtgtgagtgggtgcatgg 212
|||||||||||||||||||||| |||||||
Sbjct: 385 tgatttgtacatgtgtgagtggatgcatgg 414
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 226
Length of database: 628
Length adjustment: 9
Effective length of query: 217
Effective length of database: 619
Effective search space: 134323
Effective search space used: 134323
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no078_c15.g1 MSMg01no078_c15.g1 CHROMAT_FILE:
MSMg01no078_c15.g1 PHD_FILE: MSMg01no078_c15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:26:24 2005
(170 letters)
>mm_chr1_60125988_60126557
Length = 570
Score = 306 bits (158), Expect = 6e-88
Identities = 167/170 (98%)
Strand = Plus / Minus
Query: 1 aatgattagtaagaaatggatatgtcagtaagtgatgatagtaatatgaaaccattgcac 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 370 aatgattagtaagaaatggatatgtcagtaagtgatgatagtaatatgaaaccattgcac 311
Query: 61 gtagagtgtggtcagtgagattttcagagagcatggcatttgagttggaagctcatggta 120
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gtagagtatggtcagtgagattttcagagagcatggcatttgagttggaagctcatggta 251
Query: 121 gagggtaaggagggaaaggaatgatgtatggagaatatatcatttctctg 170
||||||||||||||||||||||||||||||||||||| | ||||||||||
Sbjct: 250 gagggtaaggagggaaaggaatgatgtatggagaatagaccatttctctg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 170
Length of database: 570
Length adjustment: 8
Effective length of query: 162
Effective length of database: 562
Effective search space: 91044
Effective search space used: 91044
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
