Query= MSMg01no081_g02.b1 MSMg01no081_g02.b1 CHROMAT_FILE:
MSMg01no081_g02.b1 PHD_FILE: MSMg01no081_g02.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:30:33 2005
(461 letters)
>mm_chr1_189180702_189181562
Length = 861
Score = 820 bits (424), Expect = 0.0
Identities = 448/456 (98%)
Strand = Plus / Plus
Query: 6 gaattcttggattccatctcgctctggggaccggtgtcctaagggcttctctggaagcca 65
||||||||||| | |||||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 206 gaattcttggagtggatctcgctctggggacaggtgtcctaagggcttctctggaagcca 265
Query: 66 gagacttgagtgaagaaccgtcttgagggacgactcattgtattcatccacgcacaagct 125
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 gagacttgagtgaagaaccgtcttgagggacgactcattgtattcatccacgcacaagct 325
Query: 126 agagatcccacactgttctttatgtccctccccctgaagtagctcctcaccctgcccagg 185
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 326 agagatcccacgctgttctttatgtccctccccctgaagtagctcctcaccctgcccagg 385
Query: 186 ccggtcagcacacaggactgtggcctataaggttgagtaggggtgctgatgtgggggagc 245
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 ccggtcagcacacaggactgtggcctataaggttgagtaggggtgctgatgtgggggagc 445
Query: 246 caagaggcagaggatgaagataggcagcaccccagggacactacttacagtgtcagctat 305
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 caagaggcagaggatgaagataggcagcaccccagggacactacttacagtgtcagctat 505
Query: 306 gtaaggagcccttgcttaagaggaaccccccaaagggagctttcccacacttgtcagttg 365
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 506 gtaaggagcccttgcttaagaggaaccccccaaagggagctttcccacacttgtcagttg 565
Query: 366 agcgtacacagatacctactgggttccaacacactatggtgaagagaggaagggggctcc 425
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct: 566 agcgtacacagatacctactgggtcccaacacactatggtgaagagaggaagggggcttc 625
Query: 426 atcacttgggtccactgaatcacagagactcctaat 461
|||||||||| |||||||||||||||||||||||||
Sbjct: 626 atcacttgggcccactgaatcacagagactcctaat 661
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 20
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 461
Length of database: 861
Length adjustment: 10
Effective length of query: 451
Effective length of database: 851
Effective search space: 383801
Effective search space used: 383801
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no081_g02.g1 MSMg01no081_g02.g1 CHROMAT_FILE:
MSMg01no081_g02.g1 PHD_FILE: MSMg01no081_g02.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:30:34 2005
(389 letters)
>mm_chr1_189367274_189368066
Length = 793
Score = 710 bits (367), Expect = 0.0
Identities = 385/393 (97%), Gaps = 4/393 (1%)
Strand = Plus / Minus
Query: 1 tcccccattgagtctgttcccgtagtagacaaagttcttgagaaccaaaagaattgacgt 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 593 tcccccattgagtctgttcctgtagtagacaaagttcttgagaaccaaaagaattgacgt 534
Query: 61 cctctgaggtaggaattcctcttacttaccagcctaattagaaggatcttgactgtttcc 120
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 533 cctctgaggtaggaattcctcttacttagcagcctaattagaaggatcttgactgtttcc 474
Query: 121 ttggggttttccaggtggtgccatgttcttatggaaagacactggctgctttcccagtag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 473 ttggggttttccaggtggtgccatgttcttatggaaagacactggctgctttcccagtag 414
Query: 181 atgctgaggccaaggctccacttcagtctgaatggtcacttttccagccacagggccttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 413 atgctgaggccaaggctccacttcagtctgaatggtcacttttccagccacagggccttc 354
Query: 241 acatcactataaaaccctactcttattaagcattgtaattttgtgaagatagacaattgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 353 acatcactataaaaccctactcttattaagcattgtaattttgtgaagatagacaattgc 294
Query: 301 ----aaaaaaaaaatactgttgccggtatcttatttcagcctcaaacaccttttgaagta 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 293 aaaaaaaaaaaaaatactgttgccggtatcttatttcagcctcaaacaccttttgaagta 234
Query: 357 taagaggatgccttttctacaacctacagacac 389
|||||||||||||||| |||||||||||||||
Sbjct: 233 gaagaggatgccttttccacaacctacagacac 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 15
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 389
Length of database: 793
Length adjustment: 9
Effective length of query: 380
Effective length of database: 784
Effective search space: 297920
Effective search space used: 297920
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
