Query= MSMg01no082_g13.b1 MSMg01no082_g13.b1 CHROMAT_FILE:
MSMg01no082_g13.b1 PHD_FILE: MSMg01no082_g13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:52 2005
(455 letters)
>mm_chr1_175239965_175240819
Length = 855
Score = 853 bits (441), Expect = 0.0
Identities = 447/449 (99%)
Strand = Plus / Minus
Query: 7 ggggagaaaacttggtcaagaacacttaaaaacaacagccagtaataatttcatttctta 66
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 855 ggggagaaaacttggtcaagaacacttaaaaacaacagccagtaataatttcatttctta 796
Query: 67 agtgaggatttggtcagtgtaacaaagttaggtttgggtgtcagtcagtccaggatgaaa 126
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 795 agtgaggatttggtcagtgtaacaaagttaggtttgggtgtcagtcagtccaggatgaaa 736
Query: 127 atctcactacagctgctttctagctgttaatattggacaaagcacctgaactttatgaac 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 735 atctcactacagctgctttctagctgttaatattggacaaagcacctgaactttatgaac 676
Query: 187 taatacttcctcacgtgtaaccatgatcgcaacagaacacaagtccaagagacaaatgac 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 675 taatacttcctcacgtgtaaccatgatcgcaacagaacacaagtccaagagacaaatgac 616
Query: 247 aggggagtcaagtaagtttttgtgtgtgtgtgtcttgtaacagtaaaatactgtcatctc 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 615 aggggagtcaagtaagtttttgtgtgtgtgtgtcttgtaacagtaaaatactgtcatctc 556
Query: 307 tattcagtcttttatctgctgtcgtggggacttgcctggagaagttgtgccagaacagtg 366
|||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 555 tattcagtcttttatctgctgtcgtggggacttgggtggagaagttgtgccagaacagtg 496
Query: 367 acctgaaaaacaaaaagaacaaaatccaaagacaggcaagaaggctgtatattgtttgca 426
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 495 acctgaaaaacaaaaagaacaaaatccaaagacaggcaagaaggctgtatattgtttgca 436
Query: 427 gtactttcattgtgaatgccacaaatgca 455
|||||||||||||||||||||||||||||
Sbjct: 435 gtactttcattgtgaatgccacaaatgca 407
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 455
Length of database: 855
Length adjustment: 10
Effective length of query: 445
Effective length of database: 845
Effective search space: 376025
Effective search space used: 376025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no082_g13.g1 MSMg01no082_g13.g1 CHROMAT_FILE:
MSMg01no082_g13.g1 PHD_FILE: MSMg01no082_g13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:31:52 2005
(425 letters)
>mm_chr1_175082407_175083231
Length = 825
Score = 799 bits (413), Expect = 0.0
Identities = 422/427 (98%), Gaps = 4/427 (0%)
Strand = Plus / Plus
Query: 1 catttctaaaacagtgattgacacaagaactttgctcaaaattttagctatgatatattg 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 catttctaaaacagtgattgacacaagaactttgctcaaaattttagctatgatatattg 260
Query: 61 tagagaaactttaaaaaatgattccatcatgtttattgagataaattcactctgattcaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagagaaactttaaaaaatgattccatcatgtttattgagataaattcactctgattcaa 320
Query: 121 tttagttgtcaggaacacagtattttctccttaaaacttgttttaaaaaaactgattttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tttagttgtcaggaacacagtattttctccttaaaacttgttttaaaaaaactgattttt 380
Query: 181 ttcattagcatttagaagtctttattttttctttttctaaagacttttcataggaaattt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcattagcatttagaagtctttattttttctttttctaaagacttttcataggaaattt 440
Query: 241 tattttctctgcagtctgatgcctctatcctccagtaagtcatctttaaccatgatgctc 300
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 441 tattttctctgcagtctgatgcttctatcctccagtaagtcatctttaaccatgatgctc 500
Query: 301 tgctgaaagtcactgaaggtgtgcctataaccctataattttccagtgtttaagaaagaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 tgctgaaagtcactgaaggtgtgcctataaccctataattttccagtgtttaagaaagaa 560
Query: 361 agaaagaacacatattgcagtgtgagtgtgagtgagtgagtg----tgtgtgagtgtgtg 416
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||||
Sbjct: 561 agaaagaacacatattgcagtgtgagtgtgagtgagtgagtgagtgtgtgtgagtgtgtg 620
Query: 417 tgtgtgt 423
|||||||
Sbjct: 621 tgtgtgt 627
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 27
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 425
Length of database: 825
Length adjustment: 9
Effective length of query: 416
Effective length of database: 816
Effective search space: 339456
Effective search space used: 339456
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
