Query= MSMg01no082_o22.b1 MSMg01no082_o22.b1 CHROMAT_FILE:
MSMg01no082_o22.b1 PHD_FILE: MSMg01no082_o22.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:31 2005
(647 letters)
>mm_chr1_189180703_189181750
Length = 1048
Score = 1158 bits (599), Expect = 0.0
Identities = 632/643 (98%), Gaps = 1/643 (0%)
Strand = Plus / Plus
Query: 5 gaattcttggagtggccctcgctctggggaccggtgtcctaagggcttctctggaagcca 64
||||||||||||||| |||||||||||||| ||||||||||||||||||||||||||||
Sbjct: 205 gaattcttggagtggatctcgctctggggacaggtgtcctaagggcttctctggaagcca 264
Query: 65 gagacttgagtgaagaaccgtcttgagggacgactcattgtattcatccacgcacaagct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 gagacttgagtgaagaaccgtcttgagggacgactcattgtattcatccacgcacaagct 324
Query: 125 agagatcccacactgttctttatgtccctccccctgaagtagctcctcaccctgcccagg 184
||||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 agagatcccacgctgttctttatgtccctccccctgaagtagctcctcaccctgcccagg 384
Query: 185 ccggtcagcacacaggactgtggcctataaggttgagtaggggtgctgatgtgggggagc 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ccggtcagcacacaggactgtggcctataaggttgagtaggggtgctgatgtgggggagc 444
Query: 245 caagaggcagaggatgaagataggcagcaccccagggacactacttacagtgtcagctat 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 caagaggcagaggatgaagataggcagcaccccagggacactacttacagtgtcagctat 504
Query: 305 gtaaggagcccttgcttaagaggaaccccccaaagggagctttcccacacttgtcagttg 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gtaaggagcccttgcttaagaggaaccccccaaagggagctttcccacacttgtcagttg 564
Query: 365 agcgtacacagatacctactgggttccaacacactatggtgaagagaggaagggggctcc 424
|||||||||||||||||||||||| ||||||||||||||||||||||||||||||||| |
Sbjct: 565 agcgtacacagatacctactgggtcccaacacactatggtgaagagaggaagggggcttc 624
Query: 425 atcacttgggcccactgaatcacagagactcctaataggggagcacatgggtatttaatg 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 625 atcacttgggcccactgaatcacagagactcctaataggggagcacatgggtatttaatg 684
Query: 485 tacatggaaagtctctgccacgtgtccatactgtggcatatgtccagattgttaaatatt 544
||||||||||||||||||||||| ||||||||||||||||||||||| ||||||||||||
Sbjct: 685 tacatggaaagtctctgccacgtctccatactgtggcatatgtccaggttgttaaatatt 744
Query: 545 aaattagtgtggtccatacttcattgaatttcagacaccataactgttaagat-tacttt 603
||||||| ||||||||||||||||||||||||||||||||||||||||||||| ||| ||
Sbjct: 745 aaattagcgtggtccatacttcattgaatttcagacaccataactgttaagatgtacctt 804
Query: 604 attttaatggagaagcgagagaatcaggaatgtttctctccac 646
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 805 attttaatggagaagcgagagaatcaggaatgtttctctccac 847
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1048
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1038
Effective search space: 661206
Effective search space used: 661206
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no082_o22.g1 MSMg01no082_o22.g1 CHROMAT_FILE:
MSMg01no082_o22.g1 PHD_FILE: MSMg01no082_o22.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:32:31 2005
(618 letters)
>mm_chr1_189367045_189368066
Length = 1022
Score = 1122 bits (580), Expect = 0.0
Identities = 610/622 (98%), Gaps = 4/622 (0%)
Strand = Plus / Minus
Query: 1 tcccccattgagtctgttcccgtagtagacaaagttcttgagaaccaaaagaattgacgt 60
|||||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 822 tcccccattgagtctgttcctgtagtagacaaagttcttgagaaccaaaagaattgacgt 763
Query: 61 cctctgaggtaggaattcctcttacttaccagcctaattagaaggatcttgactgtttcc 120
|||||||||||||||||||||||||||| |||||||||||||||||||||||||||||||
Sbjct: 762 cctctgaggtaggaattcctcttacttagcagcctaattagaaggatcttgactgtttcc 703
Query: 121 ttggggttttccaggtggtgccatgttcttatgtaaagacactggctgctttcccagtag 180
||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 702 ttggggttttccaggtggtgccatgttcttatggaaagacactggctgctttcccagtag 643
Query: 181 atgctgaggccaaggctccacttcagtctgaatggtcacttttccagccacagggccttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 642 atgctgaggccaaggctccacttcagtctgaatggtcacttttccagccacagggccttc 583
Query: 241 acatcactataaaaccctactcttattaagcattgtaattttgtgaagatagacaattgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 582 acatcactataaaaccctactcttattaagcattgtaattttgtgaagatagacaattgc 523
Query: 301 ----aaaaaaaaaatactgttgccggtatcttatttcagcctcaaacaccttttgaagta 356
||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 522 aaaaaaaaaaaaaatactgttgccggtatcttatttcagcctcaaacaccttttgaagta 463
Query: 357 gaagaggatgccttttctacaacctacagacacgtgaactgtcaggcccagggctgcagt 416
||||||||||||||||| ||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 462 gaagaggatgccttttccacaacctacagacacgtgaactgtcaggctcagggctgcagt 403
Query: 417 ctatggagacgttgcctaaaagaagtagaaaaagcagggctcttccttcccagttccaca 476
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 402 ctatggagacgttgcctaaaagaagtagaaaaagcagggctcttccttcccagttccaca 343
Query: 477 caagaacagtagaggctgggattgtctagttttctaattctgactggtgtaaaggctgat 536
|||||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||
Sbjct: 342 caagaacagtagaggctgggatggtctagttttctaattctgactgatgtaaaggctgat 283
Query: 537 catgttccatgagcttgccaaatctttcaggactaattcaaaaactaaactgtggatggt 596
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 282 catgttccatgagcttgccaaatctttcaggactaattcaaaaactaaactgtggatgtt 223
Query: 597 tttcaaggaatcacaagccaag 618
||||||||||||||||||||||
Sbjct: 222 tttcaaggaatcacaagccaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 28
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 618
Length of database: 1022
Length adjustment: 10
Effective length of query: 608
Effective length of database: 1012
Effective search space: 615296
Effective search space used: 615296
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
