XXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATTCA
TTAGTATACCCAAGTAGGTCTGTAAAATTCTATGACGTGTACAAGTGACT
TCAGTCCTTTTTTTTTTATTAAACATTTTATTCATTTACATTTCAAATGT
TATCCCCTTTCCTTGTTTCTCTTCAGCAAGCCCCCAATCCCATTCCCCTC
CCCCTGATTCTATGAGGGTGCTCCCTCACCTACCCACCAACACCCACCTC
ACCACCATAGCATTCCCCTAAACTGGGGTATTGAGCTTTCACAGGACCAA
GGGCCTCTCCTCCCATTGATGCCTTATAAGGCCATCCTCTGCTACAAATG
CAGCTGGGGCCAAGAGTCCCTCCATGTATACACTTTGGTTGGTGGTTTAG
TCCCTAGGACATCTGGAAGTCTGGTTGGTTGATATTGTTATTCTTCCTAT
GGACTTGCAAACTCCTTCAGATTCTTTAATCCTTTCTCTAACGCCTTCAT
TTGGGGTCCCATTAGTTCAATGGTTGGCTACAAGTATCTGCCTTTTTTTT
TGGGGGGGGGGTCTGACTCTCACAGAGCCTCTCAGGAGACAACTATATCA
GGCTCCAGTAACAAGAACTGCAAGGTTCAGAAGAAAATAATCAAAGATCT
GAGAAGATGGAAAGATTTTCCATTCTCACAGATTGGCAGGATTAATGTAG
TAAAAATGGTCA

ATGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXATTCATTTAGTAGCATTTCTATGTTTTATAAAT
GTTCCTTTTAAATAATTGCAATAAAATTAAAATGTCTACTTTATTTAAGT
CCACTATTTTAATATAATAAGAAACTTTGTTGAAATATCTAAACATGCTG
ATTGGCCCAGCAAGGGGTAATCAACTTTATGATGAAATTATTAAATATTC
CTAGTCCTAAGGTAATGAGGCCTTGGGTGACATCAGAAACTTTTAATCAA
AGATAATTAGTGATAGTAATAAAGTCCAACAAGCATTTCCACACACTAAA
TGTTTATTAAGTTTACAAAACTCTGTCTAGATATGGAGCAATATCTCAAC
AATTAGCAGCTTTTACTTATCTTGCAGACAATCTAAATTCAACTCCCAGA
ATCTAAACCAATATCAAATATGTTACAGCCAATGGTAACTCCTGCCTGAA
GAGTATCTGAGACCTCTCCTCTGCAATTACTTGCACTCACATGCATATAG
CCCAATATAGATGTGAAAGATGTGAAAGAGAAATAGTCTTCCCTGAAGAA
GAGAAAACACACACACACACACACACACACACACACACACACACACACAC
ACACACACACACTTTTGTTGTTGGACTTAAGTGATCCTCCTACCTCAGGG
TCCTCATTACCAG

Query= MSMg01no083_f13.g1 MSMg01no083_f13.g1 CHROMAT_FILE:
MSMg01no083_f13.g1 PHD_FILE: MSMg01no083_f13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:03 2005
         (598 letters)



>mm_chr1_49145284_49146281
          Length = 998

 Score = 1096 bits (567), Expect = 0.0
 Identities = 570/571 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   attcatttagtagcatttctatgttttataaatgttccttttaaataattgcaataaaat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 attcatttagtagcatttctatgttttataaatgttccttttaaataattgcaataaaat 260

                                                                       
Query: 61  taaaatgtctactttatttaagtccactattttaatataataagaaactttgttgaaata 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 taaaatgtctactttatttaagtccactattttaatataataagaaactttgttgaaata 320

                                                                       
Query: 121 tctaaacatgctgattggcccagcaaggggtaatcaactttatgatgaaattattaaata 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tctaaacatgctgattggcccagcaaggggtaatcaactttatgatgaaattattaaata 380

                                                                       
Query: 181 ttcctagtcctaaggtaatgaggccttgggtgacatcagaaacttttaatcaaagataat 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ttcctagtcctaaggtaatgaggccttgggtgacatcagaaacttttaatcaaagataat 440

                                                                       
Query: 241 tagtgatagtaataaagtccaacaagcatttccacacactaaatgtttattaagtttaca 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 tagtgatagtaataaagtccaacaagcatttccacacactaaatgtttattaagtttaca 500

                                                                       
Query: 301 aaactctgtctagatatggagcaatatctcaacaattagcagcttttacttatcttgcag 360
           |||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 501 aaactctgtctagatatggagcaatatctcaacaattagcagtttttacttatcttgcag 560

                                                                       
Query: 361 acaatctaaattcaactcccagaatctaaaccaatatcaaatatgttacagccaatggta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 acaatctaaattcaactcccagaatctaaaccaatatcaaatatgttacagccaatggta 620

                                                                       
Query: 421 actcctgcctgaagagtatctgagacctctcctctgcaattacttgcactcacatgcata 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 actcctgcctgaagagtatctgagacctctcctctgcaattacttgcactcacatgcata 680

                                                                       
Query: 481 tagcccaatatagatgtgaaagatgtgaaagagaaatagtcttccctgaagaagagaaaa 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 681 tagcccaatatagatgtgaaagatgtgaaagagaaatagtcttccctgaagaagagaaaa 740

                                          
Query: 541 cacacacacacacacacacacacacacacac 571
           |||||||||||||||||||||||||||||||
Sbjct: 741 cacacacacacacacacacacacacacacac 771


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 53
Number of extensions: 17
Number of successful extensions: 17
Number of sequences better than 10.0: 1
Number of HSP's gapped: 15
Number of HSP's successfully gapped: 1
Length of query: 598
Length of database: 998
Length adjustment: 10
Effective length of query: 588
Effective length of database: 988
Effective search space:   580944
Effective search space used:   580944
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)