Query= MSMg01no083_h17.b1 MSMg01no083_h17.b1 CHROMAT_FILE:
MSMg01no083_h17.b1 PHD_FILE: MSMg01no083_h17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:13 2005
(447 letters)
>mm_chr1_41065560_41066406
Length = 847
Score = 706 bits (365), Expect = 0.0
Identities = 419/437 (95%)
Strand = Plus / Plus
Query: 11 gaattcttctgaagcacctgttttccatatcactatagcttcccagtgtgaacagtgtgt 70
||||||||||||| || |||||||||||||||||||||||||||||||||||| |||||
Sbjct: 211 gaattcttctgaaacagttgttttccatatcactatagcttcccagtgtgaacaatgtgt 270
Query: 71 ccacaatcattgactttattatatccaatatcttcagtgaacgacagccatcttgtaata 130
|||||||||||||||||||||||||||||||||||||||||| ||||||||||||| ||
Sbjct: 271 ccacaatcattgactttattatatccaatatcttcagtgaacaacagccatcttgttcta 330
Query: 131 ccttgttcatatgttgatactgaaagacatgcatttgaacatatatgcattgcttagacc 190
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 331 ccttgttcatatgttgatactgaaagacatgcatttgaacatatatacattgcttagacc 390
Query: 191 aagtttgagcatgtgcatggttttattagactcagtgccagcagccaatagtgctattga 250
||||||||||||||||||||||||||| ||||||| ||||||||||||||||||||||||
Sbjct: 391 aagtttgagcatgtgcatggttttatttgactcagcgccagcagccaatagtgctattga 450
Query: 251 ttattctacacatctctgaggacattaaaacatggtttgagccttgtcaggtatgctttg 310
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 451 ttattctacacatctctgaggacattaaaacatggtctgagccttgtcaggtatgctttg 510
Query: 311 attcttcctgttcacatggacttctgagcttcttgctggggctatatccttgcctcgagt 370
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 attcttcctgttcacatggacttctgagcttcttgctggggctatatccttgcctcgagt 570
Query: 371 tccacaccctgtctctgatttttcttgcttttcttgtcccaagattcaattcaatctcat 430
|||| | |||||||| ||||||||||||||||||||||||||||||||||| ||| |||
Sbjct: 571 tccagattctgtctctaatttttcttgcttttcttgtcccaagattcaattctatcacat 630
Query: 431 tttagactgaaaaacca 447
|| ||||||||||||||
Sbjct: 631 ttcagactgaaaaacca 647
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 447
Length of database: 847
Length adjustment: 10
Effective length of query: 437
Effective length of database: 837
Effective search space: 365769
Effective search space used: 365769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no083_h17.g1 MSMg01no083_h17.g1 CHROMAT_FILE:
MSMg01no083_h17.g1 PHD_FILE: MSMg01no083_h17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:33:13 2005
(425 letters)
>mm_chr1_41164917_41165742
Length = 826
Score = 770 bits (398), Expect = 0.0
Identities = 419/426 (98%), Gaps = 1/426 (0%)
Strand = Plus / Minus
Query: 1 agaggtgattgtgtttgttgagagtctgtctctac-aacaattgttggtcagtggagagc 59
||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 626 agaggtgattgtgtttgttgagagtctgtctctactcacaattgttggtcagtggagagc 567
Query: 60 catacagtctaagactaaaatttaggtaaaacaaagcctgtaaaagtgtaaaatctcaga 119
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 566 catacagtctaagactaaaatttaggtaaaacaaagcctgtaaaagtataaaatctcaga 507
Query: 120 gattgtccagtgtgaccactctgccttttgtgaaaaacggaggggaaaacttctaagatt 179
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 506 gattgtccagtgtgaccactctgccttttgtgaaaaacggaggggaaaacttctatgatt 447
Query: 180 tccttcatattaaagagtggaacttctcttgatcttttgaataaacttctatctaaacaa 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 446 tccttcatattaaagagtggaacttctcttgatcttttgaataaacttctatctaaacaa 387
Query: 240 tagccttctttttggtgttaaatcccatgggtagatgtataatcattttatgaatatgca 299
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 386 tagccttctttttggtgttaaatcccatgggtagatgtataatcattttatgaatatgca 327
Query: 300 ggttaaataaagaaaggagtcaaagtagaatttgatggcacactcttgctgcaaaccacc 359
|||||||||||||||||||||||||||||||||||||| | | |||||||||||||||||
Sbjct: 326 ggttaaataaagaaaggagtcaaagtagaatttgatgggagattcttgctgcaaaccacc 267
Query: 360 agttagtttgataactcttaaggaggagctgtctccctccctctctctcagtgaatgatg 419
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 266 agttagtttgataactcttaaggaggagctgtctccctccctctctctcagtgaatgatg 207
Query: 420 ggtgaa 425
||||||
Sbjct: 206 ggtgaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 425
Length of database: 826
Length adjustment: 9
Effective length of query: 416
Effective length of database: 817
Effective search space: 339872
Effective search space used: 339872
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
