Query= MSMg01no084_p15.b1 MSMg01no084_p15.b1 CHROMAT_FILE:
MSMg01no084_p15.b1 PHD_FILE: MSMg01no084_p15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:35:09 2005
(647 letters)
>mm_chr1_109711272_109712317
Length = 1046
Score = 1237 bits (640), Expect = 0.0
Identities = 643/644 (99%), Gaps = 1/644 (0%)
Strand = Plus / Plus
Query: 4 ggaattcactagcctttggtttccaatagccacagatcatctccaaccctgacaaaacta 63
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ggaattcactagcctttggtttccaatagccacagatcatctccaaccctgacaaaacta 263
Query: 64 tttcttggctgccttggagactgttacctaagagagatttgctgtagttgtaataactgc 123
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tttcttggctgccttggagactgttacctaagagagatttgctgtagttgtaataactgc 323
Query: 124 acctccagaggaaataaagctctctggccacatttccaatctcccttttatggaagcact 183
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 acctccagaggaaataaagctctctggccacatttccaatctcccttttatggaagcact 383
Query: 184 agaaatcatgatttcatggacctattcacaaatgaccttacccatatagcaatattgggc 243
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 agaaatcatgatttcatggacctattcacaaatgaccttacccatatagcaatattgggc 443
Query: 244 actacccaacctgatggatgaatactccaggcccttagcttttgcttcctgtagtaataa 303
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 444 actacccaacctgatggatgaatactccaggcccttagcttttgcttcctgtagtaataa 503
Query: 304 atgttgcttactgtgtccacttgccagagatagaggtaccatcagggcagaaaggtaagt 363
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 atgttgcttactgtgtccacttgccagagatagaggtaccatcagggcagaaaggtaagt 563
Query: 364 gggatgttacagcattgaggatttcttagctctttttcataataatgtgtttttgactgc 423
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 564 gggatgttacagcattgaggatttcttagctctttttcataataatgtgtttttgactgc 623
Query: 424 taagggtaatcttgactcttctttcatttggccctcttccctcccccaactccctactct 483
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 624 taagggtaatcttgactcttctttcatttggccctcttccctcccccaactccctactct 683
Query: 484 gcattttaaactgctatatattcatataagtcttcaatttttttccccttttcagtgcac 543
||||||||||||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 684 gcattttaaactgctatatattcatataagtcttcaatttttt-ccccttttcagtgcac 742
Query: 544 tgaaaatttctactcatgcataaaagatgctctgaaatttcctgtcacagctgcataagt 603
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 743 tgaaaatttctactcatgcataaaagatgctctgaaatttcctgtcacagctgcataagt 802
Query: 604 gcttatttatttctcactctttggaagccaggctctgagttagt 647
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 803 gcttatttatttctcactctttggaagccaggctctgagttagt 846
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 34
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 647
Length of database: 1046
Length adjustment: 10
Effective length of query: 637
Effective length of database: 1036
Effective search space: 659932
Effective search space used: 659932
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no084_p15.g1 MSMg01no084_p15.g1 CHROMAT_FILE:
MSMg01no084_p15.g1 PHD_FILE: MSMg01no084_p15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:35:09 2005
(634 letters)
>mm_chr1_109807440_109808473
Length = 1034
Score = 832 bits (430), Expect = 0.0
Identities = 433/434 (99%)
Strand = Plus / Minus
Query: 1 atttagtaagacatttagtttgggggataaacttttaatacatgtcagaataaagatagc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 434 atttagtaagacatttagtttgggggataaacttttaatacatgtcagaataaagatagc 375
Query: 61 agtttagccataaaattagatctacttcaagaaacttaaagaagaagggtgaatgaaact 120
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 374 agtttacccataaaattagatctacttcaagaaacttaaagaagaagggtgaatgaaact 315
Query: 121 caagtctagatatatcctgggaaagggatgtggatttaatattccaaaataaatcactgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 314 caagtctagatatatcctgggaaagggatgtggatttaatattccaaaataaatcactgt 255
Query: 181 actctcatcattattaataaaactgaaaaaaccttatatcaagaaatacattagaatatt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 254 actctcatcattattaataaaactgaaaaaaccttatatcaagaaatacattagaatatt 195
Query: 241 taataaaactgtaatgtttattttttattaaaataaacaaataaccaacaacaaaaatgc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 194 taataaaactgtaatgtttattttttattaaaataaacaaataaccaacaacaaaaatgc 135
Query: 301 ccaatgttttagtagataggatgaaaaaggaacctactaacccgataaagagcattgaaa 360
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 134 ccaatgttttagtagataggatgaaaaaggaacctactaacccgataaagagcattgaaa 75
Query: 361 gtgttctctagtatacttaatagtgcttaatagtgcttagagtacttaaagatcaaagca 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 74 gtgttctctagtatacttaatagtgcttaatagtgcttagagtacttaaagatcaaagca 15
Query: 421 tcacatcaaagact 434
||||||||||||||
Sbjct: 14 tcacatcaaagact 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 634
Length of database: 1034
Length adjustment: 10
Effective length of query: 624
Effective length of database: 1024
Effective search space: 638976
Effective search space used: 638976
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
