CAGXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXCGCGGAATT
CTTGATCTTACCGCACAAGCCATTGCTGTTCTGTTCAGGAATTGTTCCCC
TGTGCCCATATCTTCAATGCTCTTCCCTACTTTCTCCTCTATGCTTTTCA
GTGTCTCTGGTTTTATGTGGAGTTCCTTGATCTACTTAGATTTGAGCTTG
TACAGGGAGATAAGAATAGTTCAATTTGCATTCTTCTACATGATAGCTGC
CAGTTGAGCCAGCACCATTTGCTGAAAATGCTGTCTTTTATCCACTGGAT
GATTGTAGCTTCCTTGTCAAAGTTCAAGTGACCATAGGTGTATGAGTTCA
TTTCCAGGTCTTCAATTTTATGCCATCGATCTACCTGTCTGTCCCTGTAA
CAGTAACATGCAGTTTTTATCACAATTGCTCTGTAATGCAGCTTGAGGTC
AGGGATGGTGATTCCACCAGAGGTTCTTTTATTGTTGAGAATAGCTTCTG
CTAACTTAGGATTTTTGTTATTCCACATGAATTTGCAAATTGCCCTTTCT
AACTCTGAAGAATGGATTTGGAATTTTGATGGGGATTGCATTGAATCTGT
AAATTACTTTCAGCAAGATAGCCATTTTTACTATATTGATTCTGCCAAGT
CATGAGCATGAGAGATCTTTCTGTCTTCTGAGA

CGATACAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXTTGGCCTAGAGCTCAAAGGCAGCCACTC
TGAGGTCATTGTGAGGCCAGCTAAACCACAGTCTGTAAACTTATGTAAAT
GTGATTTGATTGGAATATATCACATTGGCTTTTCACCCCTAACAATAATA
TTGTCTTTTCTATTTCAAATGTTTCTGGCAGTGATGTTTTTCTGCTTGTT
GACTCATTTGAAATAACCAACATCTATGTACTATTATAGAAAAGAGGCTA
TAACATACAATCCTCCTGCATGGTTGTTCATTTTTACTGATCTTAAATTC
ATGCAATACTGTATTATTCTACAGAACATAGTAGTCAATATAAAAAGCTT
ATATTAACATGTTGAAGACAACCTAGATTGCTTCCTCAAAAGGAGAGTAG
AAGACTACTTTTTAAATATCTTGCTATGTCTAAAATTCTGTAATCTATTT
TATATTATGAGAATAATAGAGGTTACTCTCTCTCTTCTCTCTCTCATTCT
CTCTCTCTTTCTCTCTCTCTCTCTCACTCTGAGTGAATGTGTGTGTGTGT
TTGAGTACATATGTACGTGAATGCCACCTTATATATAAGCCTTAGTTACA
TCTTGGCACCCTCTTCTTCCTTTTTTTTCTCCTAC

Query= MSMg01no086_n05.g1 MSMg01no086_n05.g1 CHROMAT_FILE:
MSMg01no086_n05.g1 PHD_FILE: MSMg01no086_n05.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:38:43 2005
         (508 letters)



>mm_chr1_101468123_101469030
          Length = 908

 Score =  967 bits (500), Expect = 0.0
 Identities = 507/510 (99%), Gaps = 2/510 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   ttggcctagagctcaaaggcagccactctgaggtcattgtgaggccagctaaaccacagt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ttggcctagagctcaaaggcagccactctgaggtcattgtgaggccagctaaaccacagt 260

                                                                       
Query: 61  ctgtaaacttatgtaaatgtgatttgattggaatatatcacattggcttttcacccctaa 120
           |||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 261 ctgtaaacttatgtaaatgtgatttggttggaatatatcacattggcttttcacccctaa 320

                                                                       
Query: 121 caataatattgtcttttctatttcaaatgtttctggcagtgatgtttttctgcttgttga 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 caataatattgtcttttctatttcaaatgtttctggcagtgatgtttttctgcttgttga 380

                                                                       
Query: 181 ctcatttgaaataaccaacatctatgtactattatagaaaagaggctataacatacaatc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 ctcatttgaaataaccaacatctatgtactattatagaaaagaggctataacatacaatc 440

                                                                       
Query: 241 ctcctgcatggttgttcatttttactgatcttaaattcatgcaatactgtattattctac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 ctcctgcatggttgttcatttttactgatcttaaattcatgcaatactgtattattctac 500

                                                                       
Query: 301 agaacatagtagtcaatataaaaagcttatattaacatgttgaagacaacctagattgct 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 agaacatagtagtcaatataaaaagcttatattaacatgttgaagacaacctagattgct 560

                                                                       
Query: 361 tcctcaaaaggagagtagaagactactttttaaatatcttgctatgtctaaaattctgta 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 tcctcaaaaggagagtagaagactactttttaaatatcttgctatgtctaaaattctgta 620

                                                                       
Query: 421 atctattttatattatgagaataatagaggttactctctctcttctctctctcattctct 480
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 atctattttatattatgagaataatagaggttactctctctcttctctctctcattctct 680

                                         
Query: 481 ctctctttctctctctctctctc--actct 508
           |||||||||||||||||||||||  |||||
Sbjct: 681 ctctctttctctctctctctctctcactct 710


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 508
Length of database: 908
Length adjustment: 10
Effective length of query: 498
Effective length of database: 898
Effective search space:   447204
Effective search space used:   447204
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)