Query= MSMg01no086_n15.b1 MSMg01no086_n15.b1 CHROMAT_FILE:
MSMg01no086_n15.b1 PHD_FILE: MSMg01no086_n15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:38:45 2005
(127 letters)
>mm_chr1_160028076_160028601
Length = 526
Score = 230 bits (119), Expect = 2e-65
Identities = 125/127 (98%), Gaps = 1/127 (0%)
Strand = Plus / Plus
Query: 1 cacagggaaaataacattaatgactttgtatctctgagtttaatccagattgtcccaaaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cacagggaaaataacattaatgactttgtatctctgagtttaatccagattgtcccaaaa 260
Query: 61 gtgttctagggagagaaaagtgttgctctgggatcacaaagggtgtgacaagtgaaggga 120
||||||| ||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 261 gtgttct-gggagagaaaagtgttgctctgggatcacaaagggtgtggcaagtgaaggga 319
Query: 121 gtaagta 127
|||||||
Sbjct: 320 gtaagta 326
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 6
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 127
Length of database: 526
Length adjustment: 8
Effective length of query: 119
Effective length of database: 518
Effective search space: 61642
Effective search space used: 61642
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no086_n15.g1 MSMg01no086_n15.g1 CHROMAT_FILE:
MSMg01no086_n15.g1 PHD_FILE: MSMg01no086_n15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:38:45 2005
(289 letters)
>mm_chr1_160179147_160179835
Length = 689
Score = 526 bits (272), Expect = e-154
Identities = 284/288 (98%)
Strand = Plus / Minus
Query: 1 cagaccctgctgaagaggctccccagtgaccggttcctgaactccacagccatctcccag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 488 cagaccctgctgaagaggctccccagtgaccggttcctgaactccacagccatctcccag 429
Query: 61 tactggaccatggactctaacctccagcaccgttatcagcagctgggagccagtttgaaa 120
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 428 tactggaccatggactctaacctccagcaccgttatcagcagctgggagccagcttgaaa 369
Query: 121 gtcctgttaaagaagatgcaccggattgtccgccgcctcttcaatctctgcaagcgctgt 180
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 368 gtcctgttaaagaagatgcaccggatcgtccgccgcctcttcaatctctgcaagcgctgt 309
Query: 181 catcggcagcctcgcttccgcctgcccaaggagaggtgagcacgcaggcttggagcctgc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 308 catcggcagcctcgcttccgcctgcccaaggagaggtgagcacgcaggcttggagcctgc 249
Query: 241 gcccagctactcctggctttagctgctgaggccaggaaagattctgtg 288
||||||| |||||||||||||||||||||||||||||||||| |||||
Sbjct: 248 gcccagcaactcctggctttagctgctgaggccaggaaagatgctgtg 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 289
Length of database: 689
Length adjustment: 9
Effective length of query: 280
Effective length of database: 680
Effective search space: 190400
Effective search space used: 190400
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
