CTCTCGGGGGTTCTCCCCCCCCCCCTTTTTTCCGCCTTTCCTTTTTTTTT
TGCCCGTTTTTTCGCTTTTTCCTATCCACCCCCGCCCTTTTTCGCGCGCC
GGGGGGATGGGCGGTTTTTACACCCCTTTTTTCCGCTACCCTTTTCTGCT
GAGGTTTGGCGTGTGTCTTGGCTCGCACCGCCGGGCCGCCCGAGCGGGTG
ATGTTCGTCACTTGTCGGCAAGTAAGTAAACTCCGCCACTAGTAAACTCT
TATGCCTTCCCCTTCCTCCTGATTTCGGGCGTGTTCCGGGTCTTTAGTAT
GGCGGGCCATTTATCCGTGCGTTTTAGCCGTACCGTTGGTAACGGTTTGT
AGTGTCGCGTCGTTACATTACCAACAGGGCGCGTTCGCCAATATTCCTTC
TGCGGGTTCGCGGTGTTTGCCGGGTCGGTTCTATCGGGGGGGGATTTGTT
TACTTTGCGGGGCTTGGGCGGGGCGCTGTTTGTTGCAATTTAGTACGTAT
AGGTGGGCCATTTTTGCCGCCGCGGTTCCGCACATACAAATTACCCCTTT
TTCGTTTGGGTTCGCAACATGGCTCTCCTGAGCGGCTTGTGAGCGGGTAC
CGCGTTTTACGGGCGCGCGGGGAGTCTTGGCGCTTGCCGCCCCCTGGGTT
TTCGGTCGTGCGCCCCCCTGTTTTTGTTTCTTTTTCCTTGTCGCTGGCGC
AGTATGTGACCGAGTGGCCAGTATCGGGCTTTGTTTTCCGCCCGCGTTAA
GCTCGGTCCCGGCACCGTTCCCGCGGTTTCCACGCGATTCCCCCTCTTTA
TTACCCCGCGTTTCCTCGGTGTTTTTTTTTTCGCGTGTTTATATTCCCGG
TTTTCGCGGTTATTTTGCGGCTTTTTGCGCAATGCGTGTGCCCGGGGTAA
AATCGGGCCTAAATCTTATAGTTACGCCGGGCGTACTCCGCAGCCGTATA
ATATTTTCCCCACGCCCTTTTT

CGATGAAGTXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTACTTTTTTCCCTTAAATGTTTTCCTG
CTTCCATCTTTTCCTGTTACTCTGCGTGTTTTTTATATTGCTTACTTTTA
AGACTTTCTCCTTTTTAGAATTTTATCTGTGTGATTGTGTAATAGGTCAA
TCATATTTGAGTTGTATTGAATTATATTAGTGTTCATCTAGTCTTTATCT
TTATTGGTGATTGTTCAGATATTCTCTACTAAATTTATTACTTAATGTCA
CATGATAAACAAGCTAGGGCGGAGTATTTTTCCCCCAATCAGATTCTCTC
TGTGCGGTGTTGCTGCTTCTCAGTGCTCTGTCTTCAAGATCACTTATCTT
TTCTTTTTCCAGTAAAACTGGGTTTTTAGATCATCTCAGGTTTTCCTTCA
GCTCTACAAACATTAGCCCTTTTTCTTTTTGCCTTTTTGTCAAGGTTAGA
ACAAATGTTAAGTATATTTTCAGAAATTATTTTANAGACCTCAAGCAGTA
ATTTGATCCTGACAGTCATCTTAGGTCTGTCCCTCCTTAACTGGGTTTTC
TCTTAGTGACAGACAAAGCTGCTTCCTTACCTTGTCAGTGTGGGCTCGCT
GTCAGGTGACACAGTCTCTGTCATTATTTAGCGATTAATTCCTTCTCTTA
TTCTCATACTCCCAGG

Query= MSMg01no089_k21.g1 MSMg01no089_k21.g1 CHROMAT_FILE:
MSMg01no089_k21.g1 PHD_FILE: MSMg01no089_k21.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:42:34 2005
         (553 letters)



>mm_chr1_38100148_38101100
          Length = 953

 Score = 1042 bits (539), Expect = 0.0
 Identities = 552/562 (98%), Gaps = 9/562 (1%)
 Strand = Plus / Plus

                                                                       
Query: 1   tacttttttcccttaaatgttttc---------ctgcttccatcttttcctgttactctg 51
           ||||||||||||||||||||||||         |||||||||||||||||||||||||||
Sbjct: 192 tacttttttcccttaaatgttttcctgcttttgctgcttccatcttttcctgttactctg 251

                                                                       
Query: 52  cgtgttttttatattgcttacttttaagactttctcctttttagaattttatctgtgtga 111
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 252 cgtgttttttatattgcttacttttaagactttctcctttttagaattttatctgtgtga 311

                                                                       
Query: 112 ttgtgtaataggtcaatcatatttgagttgtattgaattatattagtgttcatctagtct 171
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 312 ttgtgtaataggtcaatcatatttgagttgtattgaattatattagtgttcatctagtct 371

                                                                       
Query: 172 ttatctttattggtgattgttcagatattctctactaaatttattacttaatgtcacatg 231
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 372 ttatctttattggtgattgttcagatattctctactaaatttattacttaatgtcacatg 431

                                                                       
Query: 232 ataaacaagctagggcggagtatttttcccccaatcagattctctctgtgcggtgttgct 291
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 432 ataaacaagctagggcggagtatttttcccccaatcagattctctctgtgcggtgttgct 491

                                                                       
Query: 292 gcttctcagtgctctgtcttcaagatcacttatcttttctttttccagtaaaactgggtt 351
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 492 gcttctcagtgctctgtcttcaagatcacttatcttttctttttccagtaaaactgggtt 551

                                                                       
Query: 352 tttagatcatctcaggttttccttcagctctacaaacattagccctttttctttttgcct 411
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 552 tttagatcatctcaggttttccttcagctctacaaacattagccctttttctttttgcct 611

                                                                       
Query: 412 ttttgtcaaggttagaacaaatgttaagtatattttcagaaattattttanagacctcaa 471
           |||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 612 ttttgtcaaggttagaacaaatgttaagtatattttcagaaattattttaaagacctcaa 671

                                                                       
Query: 472 gcagtaatttgatcctgacagtcatcttaggtctgtccctccttaactgggttttctctt 531
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 672 gcagtaatttgatcctgacagtcatcttaggtctgtccctccttaactgggttttctctt 731

                                 
Query: 532 agtgacagacaaagctgcttcc 553
           ||||||||||||||||||||||
Sbjct: 732 agtgacagacaaagctgcttcc 753


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 30
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 553
Length of database: 953
Length adjustment: 10
Effective length of query: 543
Effective length of database: 943
Effective search space:   512049
Effective search space used:   512049
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)