Query= MSMg01no095_a06.b1 MSMg01no095_a06.b1 CHROMAT_FILE:
MSMg01no095_a06.b1 PHD_FILE: MSMg01no095_a06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:50:54 2005
(563 letters)
>mm_chr1_192560019_192560981
Length = 963
Score = 1019 bits (527), Expect = 0.0
Identities = 550/559 (98%), Gaps = 3/559 (0%)
Strand = Plus / Plus
Query: 5 gaattcaggttaaatgacgccctagaacagtgctttgatccaccagaaccggtgtcctta 64
||||||||||||||||| | ||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattcaggttaaatgaggtcctagaacagtgctttgatccaccagaaccggtgtcctta 264
Query: 65 aaagagccatgagagagtgttttgtatacctctgttgtgaaaagacactcaaaggaatct 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||
Sbjct: 265 aaagagccatgagagagtgttttgtatacctctgttgtgaaaagacactcaaaggaagct 324
Query: 125 gccagtgacagacagacagacagctcagatcatcttgagcttgactttctagcttccaga 184
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 325 gccagtgacagacagacagacagctcagatcatcttgagcttgactttctagcttccaga 384
Query: 185 ttgtgagaggcaaatcttcattatttaagctacacagtcatgggcattttgttacagcag 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 385 ttgtgagaggcaaatcttcattatttaagctacacagtcatgggcattttgttacagcag 444
Query: 245 cccaagatatccaagactatctttagcatcatggcatttcactaccttgggaaatgaact 304
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 445 cccaagatatccaagactatctttagcatcatggcatttcactaccttgggaaatgaact 504
Query: 305 gcttcaaaagatgcgtgtctaacagagcaggtaagtcggggccagagggaggagacaaaa 364
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 505 gcttcaaaagatgcgtgtctaacagagcaggtaagtcggggccagagggaggagacaaaa 564
Query: 365 gatgagagacaggtcagaacactgttgcatgatgctggaagatgttcagctgcagcatct 424
||||||||||||||||||||||||||||||||||| | ||||||||| ||||||||||
Sbjct: 565 gatgagagacaggtcagaacactgttgcatgatgc---atgatgttcagttgcagcatct 621
Query: 425 gctggaatgcacggggtagtgcttaagtctccacacaccagaccccgagctttagtcccc 484
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 622 gctggaatgcacggggtagtgcttaagtctccacacaccagaccccgagctttagtcccc 681
Query: 485 atgtttagctctcataatagccgcttaaaggacgtgttgttaacaccattttataggtga 544
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 682 atgtttagctctcataatagccgcttaaaggacgtgttgttaacaccattttataggtga 741
Query: 545 gaagacggaggctcttaga 563
||||| |||||||||||||
Sbjct: 742 gaagatggaggctcttaga 760
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 563
Length of database: 963
Length adjustment: 10
Effective length of query: 553
Effective length of database: 953
Effective search space: 527009
Effective search space used: 527009
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no095_a06.g1 MSMg01no095_a06.g1 CHROMAT_FILE:
MSMg01no095_a06.g1 PHD_FILE: MSMg01no095_a06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:50:54 2005
(291 letters)
>mm_chr1_192707257_192707948
Length = 692
Score = 532 bits (275), Expect = e-155
Identities = 287/291 (98%), Gaps = 1/291 (0%)
Strand = Plus / Minus
Query: 1 ctgagcaatgtgctagttctgtgacatccagcaataaacaaggagaacttggaggatttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 491 ctgagcaatgtgctagttctgtgacatccagcaataaacaaggagaacttggaggatttc 432
Query: 61 taagggcggtgatgggggttggggggcacacggcccttctcttccctccatttggctttg 120
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 431 taagggcggtgatgggggttgggggacacacggcccttctcttccctccatttggctttg 372
Query: 121 atttgggaatctcaggttgagatggggaataagagtctagtgtaaatctct-gttgcctg 179
||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||||
Sbjct: 371 atttgggaatctcaggttgagatggggaataagagtctagtgtaaatctctcgttgcctg 312
Query: 180 tggggctccacgtgaggtgggaaggctggccagagtccattttacatgagcactggcatt 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 311 tggggctccacgtgaggtgggaaggctggccagagtccattttacatgagcactggcatt 252
Query: 240 ggtgggagctcttaataggcctgtgaacttcatgatggtccgggggagcaa 290
|||||| |||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 251 ggtgggggctcttaagaggcctgtgaacttcatgatggtccgggggagcaa 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 12
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 291
Length of database: 692
Length adjustment: 9
Effective length of query: 282
Effective length of database: 683
Effective search space: 192606
Effective search space used: 192606
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
