Query= MSMg01no096_h06.b1 MSMg01no096_h06.b1 CHROMAT_FILE:
MSMg01no096_h06.b1 PHD_FILE: MSMg01no096_h06.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:52:48 2005
(463 letters)
>mm_chr1_152720053_152720914
Length = 862
Score = 841 bits (435), Expect = 0.0
Identities = 456/463 (98%), Gaps = 1/463 (0%)
Strand = Plus / Minus
Query: 1 tacagtgcttgcttctttctctgtaagaatacagctgaactctcttcacaaaagtccgaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 662 tacagtgcttgcttctttctctgtaagaatacagctgaactctcttcacaaaagtccgaa 603
Query: 61 gagactgaaaatagctacattccaaataagacctggcacagcacggctgtttcctgcctc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 602 gagactgaaaatagctacattccaaataagacctggcacagcacggctgtttcctgcctc 543
Query: 121 tccctgcttgtgttttgaaggatcttcagggagtgcctgaatcctccctgcgccatctgt 180
|||| |||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 542 tccccgcttgtgttttgaaggatcttcagggagtgcccgaatcctccctgcgccatctgt 483
Query: 181 ctccagggtgaaggatcctgcttcctgactcacaccccgttgactctcttggcagtgttc 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 482 ctccagggtgaaggatcctgcttcctgactcacaccccgttgactctcttggcagtgttc 423
Query: 241 ttcccaacatcctctggaattgggtctgatgcagtcaatatgcagggtcatttgattttt 300
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 422 ttcccaacatcctctggaattgggtctgatgcagtcaatatgtagggtcatttgattttt 363
Query: 301 ttacctccaaaaagacaaaaacaaaacaataagagaacacgactctcttggaagtggagc 360
||||||||||||||||||||||||||||| |||| ||||| |||||||||||||||||||
Sbjct: 362 ttacctccaaaaagacaaaaacaaaacaa-aagaaaacactactctcttggaagtggagc 304
Query: 361 tggggtccacatctctagacatttgcgctgggcgaggcatgtctaattaattattattta 420
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 303 tggggtccacatctctagacatttgctctgggcgaggcatgtctaattaattattattta 244
Query: 421 ttgctgttttgttttggctttgtgttgtcataagatccacaag 463
|||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 ttgctgttttgttttggctttgtgttgtcataagatccacaag 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 463
Length of database: 862
Length adjustment: 10
Effective length of query: 453
Effective length of database: 852
Effective search space: 385956
Effective search space used: 385956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no096_h06.g1 MSMg01no096_h06.g1 CHROMAT_FILE:
MSMg01no096_h06.g1 PHD_FILE: MSMg01no096_h06.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:52:49 2005
(524 letters)
>mm_chr1_152591421_152592344
Length = 924
Score = 953 bits (493), Expect = 0.0
Identities = 517/525 (98%), Gaps = 2/525 (0%)
Strand = Plus / Plus
Query: 1 cctctgatatttagatatctgggatctacacgatacctgccacaaaggtaggtaatcagt 60
|||||||||||||||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 201 cctctgatatttagatatctgggatctacacgataccttccacaaaggtaggtaatcagt 260
Query: 61 gcactgaagggatgagtgactggtgggctgtcgtaaattaaagggataaaacacttccat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gcactgaagggatgagtgactggtgggctgtcgtaaattaaagggataaaacacttccat 320
Query: 121 tagagaggcacaatgcaatcaaataatgatcgaaaggaacattttctcagttacagtgtt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tagagaggcacaatgcaatcaaataatgatcgaaaggaacattttctcagttacagtgtt 380
Query: 181 catatgtcagatatgactgtttaaaaagtatgatgttcttctatgagagtacagctagct 240
|||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 381 catatgtcagatatgactgtttaaaaagtatgatgttcttctatgagaatacagctagct 440
Query: 241 ctcaatgttttaaacacatttccaaaactgtaattaatacacttggaaatggagaagggg 300
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 441 ctcaatgttttaaacacatttccaaaactgtaattgatacacttggaaatggagaagggg 500
Query: 301 gagttatttgtagatggctaacaaacctttcagagtaaatgaaagagaacgg-cagactt 359
||||||||||||||||||||||||||||||||||||||||||||||||| || |||||||
Sbjct: 501 gagttatttgtagatggctaacaaacctttcagagtaaatgaaagagaa-ggacagactt 559
Query: 360 acaactcaggaatctttagtctccatgcaacttggaggctcactgtcacaaaggctgtgg 419
|||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 560 acaactcaggaatctttagtctttatgcaacttggaggctcactgtcacaaaggctgtgg 619
Query: 420 ccccgtgtacagagccatcactggcctccctttgaacactcaccgtggacacttaattta 479
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 620 ccccgtggacagagccatcactggcctccctttgaacactcaccgtggacacttaattta 679
Query: 480 acggactgagtcacattcccagcaatatttgtggcaacacacaga 524
|||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 680 acggactgagtcacattcccagcaatatttgtggcaacacacaga 724
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 25
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 524
Length of database: 924
Length adjustment: 10
Effective length of query: 514
Effective length of database: 914
Effective search space: 469796
Effective search space used: 469796
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
