Query= MSMg01no097_l13.b1 MSMg01no097_l13.b1 CHROMAT_FILE:
MSMg01no097_l13.b1 PHD_FILE: MSMg01no097_l13.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:54:34 2005
(109 letters)
>mm_chr1_60408803_60409312
Length = 510
Score = 201 bits (104), Expect = 9e-57
Identities = 109/112 (97%), Gaps = 3/112 (2%)
Strand = Plus / Plus
Query: 1 aactgaagaaaagtaaggatgtttgtttggttttgttttatgaagtagagacatttcttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aactgaagaaaagtaaggatgtttgtttggttttgttttatgaagtagagacatttcttc 260
Query: 61 tttttttggtatcaaaacaaaactataattttg---gggggggggttgtttg 109
||||||||||||||||||||||||||||||||| ||||||||||||||||
Sbjct: 261 tttttttggtatcaaaacaaaactataattttgtgggggggggggttgtttg 312
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 9
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 109
Length of database: 510
Length adjustment: 8
Effective length of query: 101
Effective length of database: 502
Effective search space: 50702
Effective search space used: 50702
X1: 6 (11.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 6 (12.4 bits)
S2: 6 (12.3 bits)
| Query= MSMg01no097_l13.g1 MSMg01no097_l13.g1 CHROMAT_FILE:
MSMg01no097_l13.g1 PHD_FILE: MSMg01no097_l13.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:54:34 2005
(403 letters)
>mm_chr1_60559154_60559956
Length = 803
Score = 611 bits (316), Expect = e-179
Identities = 322/324 (99%)
Strand = Plus / Minus
Query: 1 caattcacttcatattgtttaaatggttaaggcaaattttttaataacagatgctttatc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 324 caattcacttcatattgtttaaatggttaaggcaaattttttaataacagatgctttatc 265
Query: 61 tttggaataagagttgcataaataaatttactaaaaactgttattaaagatgtttacatt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 264 tttggaataagagttgcataaataaatttactaaaaactgttattaaagatgtttacatt 205
Query: 121 ttcatttgttttatgtatctgcatgtatgtgtatgtgtcatgtaccagaagagagtgtca 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 204 ttcatttgttttatgtatctgcatgtatgtgtatgtgtcatgtaccagaagagagtgtca 145
Query: 181 gatcctcaggcactggagacaagtggttgtgagtcgccagatgacagtgctgagaactga 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 144 gatcctcaggcactggagacaagtggttgtgagtcgccagatgacagtgctgagaactga 85
Query: 241 acctggttcctctataagaacagcaggagttcttggtgctgtccctccggcccaatactg 300
|||||| |||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 84 acctgggtcctctataagaacagcaggagttcttggtgctgtccctccggcccaatactg 25
Query: 301 ttacttcttagtgtttgcacagaa 324
||||||| ||||||||||||||||
Sbjct: 24 ttacttcctagtgtttgcacagaa 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 403
Length of database: 803
Length adjustment: 9
Effective length of query: 394
Effective length of database: 794
Effective search space: 312836
Effective search space used: 312836
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
