Query= MSMg01no098_e14.b1 MSMg01no098_e14.b1 CHROMAT_FILE:
MSMg01no098_e14.b1 PHD_FILE: MSMg01no098_e14.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:55:20 2005
(622 letters)
>mm_chr1_66416036_66417058
Length = 1023
Score = 1145 bits (592), Expect = 0.0
Identities = 610/616 (99%), Gaps = 1/616 (0%)
Strand = Plus / Plus
Query: 8 gaattcactaatacaa-tacttcagtgagcgggcgccagagcctgagtcatttcaactca 66
||||||||||| |||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 208 gaattcactaagacaaatacttcagtgagcgggcgccagagcctgagtcatttcaactca 267
Query: 67 ctgtgagcacagcatgaggcaagacccagtagtaatcaatccgggatgaagtgcgaaggg 126
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 268 ctgtgagcagagcatgaggcaagacccagtagtaatcaatccgggatgaagtgcgaaggg 327
Query: 127 caaagcaagacaaaggacattttcagtgccacagtgctgtagctctctaactccttgata 186
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 328 caaagcaagacaaaggacattttcagtgccacagtgctgtagctctctaactccttgata 387
Query: 187 cctgagagcagtgtttaggtaagtcctgatggattactctttagggacatatagatacaa 246
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 388 cctgagagcagtgtttaggtaagtcctgatggattactctttagggacatatagatacaa 447
Query: 247 ttatagtgagtcttattttggaaacaagaaatttcaaggaatctttgttgacaaatcaag 306
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 448 ttatagtgagtcttattttggaaacaagaaatttcaaggaatctttgttgacaaatcaag 507
Query: 307 aggaattttgaagttacagtgtcatatacacacatgcatatataaaatgtcatgcacaca 366
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 508 aggaattttgaagttacagtgtcatatacacacatgcatatataaaatgtcatgcacaca 567
Query: 367 tacatagtggatcgtttatgtgctacaaaagatactcttagaacaaagcatagagacagg 426
||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||
Sbjct: 568 tacatagtggatcgtttatgtgctaaaaaagatactcttagaacaaagcatagagacagg 627
Query: 427 cacaattttcaaggaaaatagcaagctcacatatgtttatgaaaataatagtcttatggt 486
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 628 cacaattttcaaggaaaatagcaagctcacatatgtttatgaaaataatagtcttatggt 687
Query: 487 agaatggagtaactgtttcataatatagaatatgtatgaaaggctgggactaaggcacta 546
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 688 agaatggagtaactgtttcataatatagaatatgtatgaaaggctgggactaaagcacta 747
Query: 547 acacacatatgaggctctagattcgatccctagtcctgaaaacattaactggaatgtttg 606
|||||||||||||||||||||||| |||||||||||||||||||||||||||||||||||
Sbjct: 748 acacacatatgaggctctagattcaatccctagtcctgaaaacattaactggaatgtttg 807
Query: 607 tgcataggaaaaaaaa 622
||||||||||||||||
Sbjct: 808 tgcataggaaaaaaaa 823
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 622
Length of database: 1023
Length adjustment: 10
Effective length of query: 612
Effective length of database: 1013
Effective search space: 619956
Effective search space used: 619956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no098_e14.g1 MSMg01no098_e14.g1 CHROMAT_FILE:
MSMg01no098_e14.g1 PHD_FILE: MSMg01no098_e14.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 17:55:21 2005
(344 letters)
>mm_chr1_66463968_66464711
Length = 744
Score = 665 bits (344), Expect = 0.0
Identities = 344/344 (100%)
Strand = Plus / Minus
Query: 1 ttcgaaattggagtcatagatattgtggactgacatgtgggtgacaggaaccaaactcaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 545 ttcgaaattggagtcatagatattgtggactgacatgtgggtgacaggaaccaaactcaa 486
Query: 61 gtcctttgtaagaagagtaagtgtttataaaaataaagccattgctacagctcctttcct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 485 gtcctttgtaagaagagtaagtgtttataaaaataaagccattgctacagctcctttcct 426
Query: 121 aatgatttctcccacgttttattcttttcttctattagatctttaagcttatggttgtgt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 425 aatgatttctcccacgttttattcttttcttctattagatctttaagcttatggttgtgt 366
Query: 181 aaatttgggagagacagaaataattagaaggcaaaacaagtctttcccctcctcatatgt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 365 aaatttgggagagacagaaataattagaaggcaaaacaagtctttcccctcctcatatgt 306
Query: 241 agtccaggtctctcagaatagcccaggctggactcacactggagatcgacctaaagattc 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 305 agtccaggtctctcagaatagcccaggctggactcacactggagatcgacctaaagattc 246
Query: 301 actttcctctgcctccccagcactagaattatagaaaacatatc 344
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 245 actttcctctgcctccccagcactagaattatagaaaacatatc 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 16
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 344
Length of database: 744
Length adjustment: 9
Effective length of query: 335
Effective length of database: 735
Effective search space: 246225
Effective search space used: 246225
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
