Query= MSMg01no102_i10.b1 MSMg01no102_i10.b1 CHROMAT_FILE:
MSMg01no102_i10.b1 PHD_FILE: MSMg01no102_i10.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:01:08 2005
(184 letters)
>mm_chr1_105264989_105265572
Length = 584
Score = 325 bits (168), Expect = 1e-93
Identities = 180/184 (97%)
Strand = Plus / Plus
Query: 1 ataggttttcctacagatggaccagcaactcttcagttataacttctccctggaagctaa 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 ataggttttcctacagatggaccagcaactcttcagttataacttctccctggaagctaa 260
Query: 61 gttcccgacagtgaggtcactcattcttggcaaagtctcaggtctgttttttctctttga 120
||||||||||||||||||||||||||||||||||||| ||||||| ||||||||||||||
Sbjct: 261 gttcccgacagtgaggtcactcattcttggcaaagtcacaggtcttttttttctctttga 320
Query: 121 gatatttcatagatgttgttaaacttgatgaatctgttccctatgtcggtgtgttcagtg 180
||||||||||||||||||||||||||||||||| |||||||||||| |||||||||||||
Sbjct: 321 gatatttcatagatgttgttaaacttgatgaatttgttccctatgttggtgtgttcagtg 380
Query: 181 attc 184
||||
Sbjct: 381 attc 384
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 184
Length of database: 584
Length adjustment: 8
Effective length of query: 176
Effective length of database: 576
Effective search space: 101376
Effective search space used: 101376
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no102_i10.g1 MSMg01no102_i10.g1 CHROMAT_FILE:
MSMg01no102_i10.g1 PHD_FILE: MSMg01no102_i10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:01:09 2005
(164 letters)
>mm_chr1_105399228_105399796
Length = 569
Score = 232 bits (120), Expect = 8e-66
Identities = 157/170 (92%), Gaps = 7/170 (4%)
Strand = Plus / Minus
Query: 1 gcttgctgtttctac--gg-aaaaaccagtgagcccttatggaatg-tgggactcacaac 56
||||||||||||||| || ||| | ||||||||||| |||||||| |||||||||||||
Sbjct: 369 gcttgctgtttctacagggcaaatagcagtgagccctcatggaatgctgggactcacaac 310
Query: 57 cgaggttgtactctgaccttgac-catagcatgagata-tacattactgcgcgttcacac 114
||||||||||||||||||||||| |||||||||||| | ||||||||||| ||||||||
Sbjct: 309 cgaggttgtactctgaccttgacacatagcatgaga-agtacattactgcatgttcacac 251
Query: 115 agtagtggatgccctccaaccagacctattaattattccaatgatattga 164
|||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 250 agtagtggatgccctccaaccagacctattaattattccaatgaaattga 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 5
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 164
Length of database: 569
Length adjustment: 8
Effective length of query: 156
Effective length of database: 561
Effective search space: 87516
Effective search space used: 87516
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
