Query= MSMg01no103_h11.b1 MSMg01no103_h11.b1 CHROMAT_FILE:
MSMg01no103_h11.b1 PHD_FILE: MSMg01no103_h11.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:02:24 2005
(239 letters)
>mm_chr1_61444676_61445314
Length = 639
Score = 453 bits (234), Expect = e-132
Identities = 237/238 (99%)
Strand = Plus / Minus
Query: 2 attatattaagcaaatacttaaaagcattgattttatttgactaaatagaagcccagcca 61
||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||||
Sbjct: 439 attatattaagcaaatacttaaaagcattgattttatttgactaaatagaagctcagcca 380
Query: 62 agccagacacagctgccagagtcacactgggccacaacagctggagacagacgtaggaaa 121
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 379 agccagacacagctgccagagtcacactgggccacaacagctggagacagacgtaggaaa 320
Query: 122 ctagaaattactcagttacagcccctccaaaccatgtctgacatgctatttatcttctcc 181
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ctagaaattactcagttacagcccctccaaaccatgtctgacatgctatttatcttctcc 260
Query: 182 cactgaaactctctctttctaaataaatgggggtgggtgatagctagggggttgttta 239
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 259 cactgaaactctctctttctaaataaatgggggtgggtgatagctagggggttgttta 202
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 239
Length of database: 639
Length adjustment: 9
Effective length of query: 230
Effective length of database: 630
Effective search space: 144900
Effective search space used: 144900
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no103_h11.g1 MSMg01no103_h11.g1 CHROMAT_FILE:
MSMg01no103_h11.g1 PHD_FILE: MSMg01no103_h11.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:02:24 2005
(249 letters)
>mm_chr1_61358012_61358659
Length = 648
Score = 466 bits (241), Expect = e-136
Identities = 247/249 (99%), Gaps = 1/249 (0%)
Strand = Plus / Plus
Query: 1 tgtggaagccatcttcagcggccagctggatcggccctgacccccaccccttgctccatt 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgtggaagccatcttcagcggccagctggatcggccctgacccccaccccttgctccatt 260
Query: 61 cagtttcttcttccctccatcatcccgcaggtggctgaacataagattttatggcctgat 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 cagtttcttcttccctccatcatcccgcaggtggctgaacataagattttatggcctgat 320
Query: 121 gcgtggtgggttagttgacaacgctggagaccctctttaattcaggaggtctatggagca 180
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcttggtgggttagttgacaacgctggagaccctctttaattcaggaggtctatggagca 380
Query: 181 tgggggggtgagattggaaatgggaactggggcccataaagaaaacccagattttcccaa 240
||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 tgggggg-tgagattggaaatgggaactggggcccataaagaaaacccagattttcccaa 439
Query: 241 ctcgctttt 249
|||||||||
Sbjct: 440 ctcgctttt 448
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 249
Length of database: 648
Length adjustment: 9
Effective length of query: 240
Effective length of database: 639
Effective search space: 153360
Effective search space used: 153360
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
