TCTCAAATTTGCGGCGCTAAAGACTCCTATTCGAAACGGCCGCGGAATCC
CTGATTACTTCACCTGGCAAGCCTGAATCCTGAATTCAGCACTTGGACCT
ACTGTTGTCCCCAGAAGCATGACTCCCACAGGTTGTCCTCTGACTTTTAG
AGACATGCCATGGAGTGTGTTCGCATGCACATGTGTGTGCACAACCACAC
ACACACACACACACACACATATGCACAAAATATGAAAAATATTTTTTTTC
ACTCTGTGACTTTGTGCTTTGAAAGTGTTTGAAACACGCCCTGACATTCA
GAAACGTTTTCTCATTATAGAACCATGCCTCAGCACCAACATATATGTTT
TTTTTCCCACCCCCCCCAATTCTGATTGTTTTGACACGCGTTGCTTATAC
GCCACACCAAAAAACTAACAACCCCTGGATACTTGGTAGGCGTCCCTTGC
TCGTCCCCATATGTGTTTCGACGCGGCGCGATACCAAATATCCTATTCCT
ATGCTAACCGCTCTTACTGTTTCCCACCTGAATGATTATAGCCGACTCAT
CTTTGGAAAAATTTATATTCACCCCCCCTTGTAACATATATTTTTCACAT
ACACCATCATTCTCTGTATTGAAACCGCTGCCCTCATAATAAAACGTTTT
TTCTCTTTTCCACTGCCCCTTTTGCTTATCCACTTTTTCCG

TTTACTCGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXXXXXXAGTCCTCTAGAATCTTGAGCCA
ACATAGTCATTTCCCCCTGTAAGTACATTTTCTCAGGTGTTTTCGTAACA
GATATGCAAAATGAAGAAATTCATGGATCTGCTCATATAAAATGTGTTGC
TTAATATTCATTGCCATTCTTCCTTGACAAGTAACTTAAGTCATTCTGAA
TAATCAATACCCAAATGGCCTTTATAATGTCTTACCTCAGAGACTTTCAT
AGGAACTGCATTTAGTGGTGAAACTGTAGCAAACAGAAGTAATCTGAAAT
TGAGAAATCAGGTAATTTTCATTTGATCATTATTACAGATGTCATGATTT
TCATTTGACAGCAACTTACAGTTAGATGAATTGTGTGGGAGATGGCAAGA
AGAAATTGGAAGAGGAAGCAAAGAAATAGGAGATGTGAAGAGAGAGGCGA
TGAAAGAAAGTTCCTTTTAAAAGATTTCATTTATAATTGCATGTACAAGT
GTCTCTCTGTGAGTGTGTGTGTGTGTGTGTGTGTGTGTGTGTATGTTTCC
TCCCCCTCCTTTATATCCTCACCACCTCTCCCTCCCACCTTTTACCCTCC
TTATCTATTCCATTCCACCATCACCTCTTTTCCAATCCTCCTTCTTAACC
TTTTTCATT

Query= MSMg01no103_m04.g1 MSMg01no103_m04.g1 CHROMAT_FILE:
MSMg01no103_m04.g1 PHD_FILE: MSMg01no103_m04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:02:47 2005
         (482 letters)



>mm_chr1_125181128_125182009
          Length = 882

 Score =  872 bits (451), Expect = 0.0
 Identities = 472/479 (98%), Gaps = 2/479 (0%)
 Strand = Plus / Plus

                                                                       
Query: 1   agtcctctagaatcttgagccaacatagtcatttccccctgtaagtacattttctcaggt 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 agtcctctagaatcttgagccaacatagtcatttccccctgtaagtacattttctcaggt 260

                                                                       
Query: 61  gttttcgtaacagatatgcaaaatgaagaaattcatggatctgctcatataaaatgtgtt 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 gttttcgtaacagatatgcaaaatgaagaaattcatggatctgctcatataaaatgtgtt 320

                                                                       
Query: 121 gcttaatattcattgccattcttccttgacaagtaacttaagtcattctgaataatcaat 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 gcttaatattcattgccattcttccttgacaagtaacttaagtcattctgaataatcaat 380

                                                                       
Query: 181 acccaaatggcctttataatgtcttacctcagagactttcataggaactgcatttagtgg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 acccaaatggcctttataatgtcttacctcagagactttcataggaactgcatttagtgg 440

                                                                       
Query: 241 tgaaactgtagcaaacagaagtaatctgaaattgagaaatcaggtaattttcatttgatc 300
           |||||||| ||||||||||||||||||||||||||||||||||||||||| |||||||| 
Sbjct: 441 tgaaactg-agcaaacagaagtaatctgaaattgagaaatcaggtaatttccatttgatt 499

                                                                       
Query: 301 attattacagatgtcatgattttcatttgacagcaacttacag-ttagatgaattgtgtg 359
           |||||||||||||||||||||||||||||||||||||||| |  ||||||||||||||||
Sbjct: 500 attattacagatgtcatgattttcatttgacagcaacttaaaaattagatgaattgtgtg 559

                                                                       
Query: 360 ggagatggcaagaagaaattggaagaggaagcaaagaaataggagatgtgaagagagagg 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 560 ggagatggcaagaagaaattggaagaggaagcaaagaaataggagatgtgaagagagagg 619

                                                                      
Query: 420 cgatgaaagaaagttccttttaaaagatttcatttataattgcatgtacaagtgtctct 478
           |||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 620 cgatgaaagaaagttccttttaaaagatttcatttataattgcatgtataagtgtctct 678


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 22
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 482
Length of database: 882
Length adjustment: 10
Effective length of query: 472
Effective length of database: 872
Effective search space:   411584
Effective search space used:   411584
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)