TCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTTCGNAAATCCGCGGAA
TTCTCTGCCGTATTCCTTACACTCTCTTATATCTACTATCATATCATCTG
CTAAATATGATATTTTGACTTCTTCCTCCTGCCATCTGTACTCCCTTGCT
CTCTTATTATTGTCACTTTGCTCTGTTTAGTACTTCTTGCACTATGTTTC
AACATGTAGTTAGAGCGCACTGCCTCTGTTTCGCCCTTGATCTACATGTT
ATTGTTTTCAGTTGCTCACCATTTAATTTCGAACGTCGTTCACTGTACCT
GCTGCATTATCGTTTTTATAATCGCTAACGAATGCCTCTTCGAATTTATG
CACTTTCCAATACCTTACACAAGAATGTATGTTTAACCTAGACCCCTGCT
TATTCTTTCTCTTATTCCATCACAAGTCGATTCCAGCCTTACAATCTCCT
AACCTAATGCACCACTGTTCTTGTTTCTTCTTTTATTTACTCCTCTCCCT
CCTCCTATTAACCTTATCCACTTACTCTTTCCCCTATGCTCCTACCTTAA
TCTTTTCAAATATCCTCCCTATCTCATTAATACTTACCATCCAACCCAAT
CTTATTATCCCGTTTTCCTCATATTCTCATTACCTTCCAATTTTCCCTCC
ATCCTTTCCCCATTACCTATTTCCCATCCATATCTCTTCTCCTCCTATCT
CGTATTTCATTCTCTACTTTCTATTCATCAAATAAA

CGATGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXCTTCCCCATAAGTGTTCTTCATACTGG
AGAATGTCTTGCTCTAGCACACTGACTAAAACTGTTGCTCAATTTTCCCT
TCTAGTCTCTTCATAGGCTAGAGGCTTTGCAGCAGAAACACCAAGCCAGG
GTTTGTAATTAACCAGCTCATTTGGAAATAGTTCATGGAGCAACAGAGCT
ACAAAATATGGAGAAGAATATGCTGTGGGTGGTCTATGCTTCTCTGCAGT
AGTGAGAGACGCTGTGCTAAGGGAAAGAACCAGCAGCAAAAACCAAATTC
TAGAGACTATCTTCATTTGAAACATATTATGAGGAAGTTTACACCTAAAA
TTTCTACTGAATACAGGGAACATCTAAATGAATTTCTATCCAGTTAAAAC
ATCCTATATATCATTGAAATCTATAGCTTTTGAGCTGGCTACTTTTGCTG
TAAGATTGTTTGACTTTGCAAAATCTTTTTGATGAAGTTTTAATTTAATA
AAAAGAAACAAAGATTGCTAAAACAATTGATATTAATAGATCTATATTTC
TTATAAGAGGAAAAAATTTCTAAGGGTTTATTTACCAGTATGAGCCTAAA
ATAATTTGATAAGTTCAGAATTCTCCTAGAATTAGAGCCATCCTGTAGAC
TGACAACTTGAACCTC

Query= MSMg01no104_o03.g1 MSMg01no104_o03.g1 CHROMAT_FILE:
MSMg01no104_o03.g1 PHD_FILE: MSMg01no104_o03.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:04:18 2005
         (463 letters)



>mm_chr1_48043057_48043919
          Length = 863

 Score =  872 bits (451), Expect = 0.0
 Identities = 460/463 (99%)
 Strand = Plus / Plus

                                                                       
Query: 1   cttccccataagtgttcttcatactggagaatgtcttgctctagcacactgactaaaact 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 cttccccataagtgttcttcatactggagaatgtcttgctctagcacactgactaaaact 260

                                                                       
Query: 61  gttgctcaattttcccttctagtctcttcataggctagaggctttgcagcagaaacacca 120
           |||||||||||||||||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 261 gttgctcaattttcccttctagtctcttcataggctagaggctttgcaacagaaacacca 320

                                                                       
Query: 121 agccagggtttgtaattaaccagctcatttggaaatagttcatggagcaacagagctaca 180
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 agccagggtttgtaattaaccagctcatttggaaatagttcatggagcaacagagctaca 380

                                                                       
Query: 181 aaatatggagaagaatatgctgtgggtggtctatgcttctctgcagtagtgagagacgct 240
           ||||| |||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 381 aaatacggagaagaatatgctgtgggtggtctatgcttctctgcagtagtgagagaggct 440

                                                                       
Query: 241 gtgctaagggaaagaaccagcagcaaaaaccaaattctagagactatcttcatttgaaac 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 441 gtgctaagggaaagaaccagcagcaaaaaccaaattctagagactatcttcatttgaaac 500

                                                                       
Query: 301 atattatgaggaagtttacacctaaaatttctactgaatacagggaacatctaaatgaat 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 501 atattatgaggaagtttacacctaaaatttctactgaatacagggaacatctaaatgaat 560

                                                                       
Query: 361 ttctatccagttaaaacatcctatatatcattgaaatctatagcttttgagctggctact 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 561 ttctatccagttaaaacatcctatatatcattgaaatctatagcttttgagctggctact 620

                                                      
Query: 421 tttgctgtaagattgtttgactttgcaaaatctttttgatgaa 463
           |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 621 tttgctgtaagattgtttgactttgcaaaatctttttgatgaa 663


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 463
Length of database: 863
Length adjustment: 10
Effective length of query: 453
Effective length of database: 853
Effective search space:   386409
Effective search space used:   386409
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)