Query= MSMg01no105_c23.b1 MSMg01no105_c23.b1 CHROMAT_FILE:
MSMg01no105_c23.b1 PHD_FILE: MSMg01no105_c23.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:04:44 2005
(539 letters)
>mm_chr1_108216613_108217551
Length = 939
Score = 683 bits (353), Expect = 0.0
Identities = 399/425 (93%), Gaps = 18/425 (4%)
Strand = Plus / Minus
Query: 1 gaattcctgagtcattggccctttagtttgaaatcattagacatcccagaagaaacaaat 60
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||
Sbjct: 417 gaattcctgagtcattgggagtttagtttgaaatcattagacatcccagaagaaacaaat 358
Query: 61 ttcacaagattataatgtatagtttaaataagagcaacatgattaagctagccagcgatc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 357 ttcacaagattataatgtatagtttaaataagagcaacatgattaagctagccagcgatc 298
Query: 121 ttggagaagatgagagcaaaacaagccatggctatattggctttgggaaagtcatgttca 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 297 ttggagaagatgagagcaaaacaagccatggctatattggctttgggaaagtcatgttcg 238
Query: 181 caggttgctttcaggcgtatgattcccttgtgttgtcaataaataaataaataaataaat 240
||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 237 caggttgctttcaggcgtatgattcccttgtgttgtc--------aataaataaataaat 186
Query: 241 aaataaataaataaataaataaaagggtactattggacatagtactaaatggacatagta 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 185 aaataaataaataaataaataaaagggtactattggacatagtactaaatggacatagta 126
Query: 301 attaactgttccctaagttcttatcactacacacacaagataactcagcagt-------- 352
|||||||| |||||||||||||||||||||||||||||||||||||||||||
Sbjct: 125 attaactgctccctaagttcttatcactacacacacaagataactcagcagttttttgtt 66
Query: 353 --tctttttttgtagtggatgacgttaacacagagaccaactctggtcaacatgcagagg 410
| |||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 65 tgtttttttttgtagtggatgatgttaacacagagaccaactctggtcaacatgcagaga 6
Query: 411 aaaag 415
|||||
Sbjct: 5 aaaag 1
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 8
Number of successful extensions: 8
Number of sequences better than 10.0: 1
Number of HSP's gapped: 5
Number of HSP's successfully gapped: 1
Length of query: 539
Length of database: 939
Length adjustment: 10
Effective length of query: 529
Effective length of database: 929
Effective search space: 491441
Effective search space used: 491441
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no105_c23.g1 MSMg01no105_c23.g1 CHROMAT_FILE:
MSMg01no105_c23.g1 PHD_FILE: MSMg01no105_c23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:04:44 2005
(430 letters)
>mm_chr1_108085588_108086417
Length = 830
Score = 797 bits (412), Expect = 0.0
Identities = 424/428 (99%)
Strand = Plus / Plus
Query: 3 aggttgtattattttaaatggcaatgctttcctttatagtggggtggggacttatataaa 62
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 203 aggttgtattattttaaatggcaatgctttcctttatagtggggtggggacttatataaa 262
Query: 63 caattaccaccctgcttcctgaaagtagaatgattctactttgtggactggatatgaaag 122
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 caattaccaccctgcttcctgaaagtagaatgattctactttgtggactggatatgaaag 322
Query: 123 gtatagaagtgttgaccattgtcctccaagcagagtagatgcagttctcatcagaacagc 182
|||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 323 gtatagaagtgttgaccattgttctccaagcagagtagatgcagttctcatcagaacagc 382
Query: 183 tctaactacttgcaagagaccctggagtccattgactggtgaccttccttcatagaagga 242
|||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 383 tctaactacttgcaagagaccctggagtccattgactggtgacctttcttcatagaagga 442
Query: 243 ggggtgggtagagttcttggttccccttcacctcctgagtcactcctgctggcacggccc 302
|||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 443 ggggtggggagagttcttggttccccttcacctcctgagtcactcctgctggcacggccc 502
Query: 303 agcttagccaccattgtccatggcttcctgaggtgctgtggaaggttaactgaaggaaga 362
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 503 agcttagccaccattgtccatggcttcctgaggtgctgtggaaggttaactgaaggaaga 562
Query: 363 ttccgtcggtgcagttaggagaaagtcctcatccatacttggatgagtggcgtccgtgct 422
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 563 ttccgtcggtgcagttaggagaaagtcctcatccatacttggatgagtggtgtccgtgct 622
Query: 423 aagccatc 430
||||||||
Sbjct: 623 aagccatc 630
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 23
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 430
Length of database: 830
Length adjustment: 9
Effective length of query: 421
Effective length of database: 821
Effective search space: 345641
Effective search space used: 345641
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
