TCGTCTCTAACATCAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXCGCGGAATTCACTTTGAATCCTTGTCACAGGAAAGCAGTCATT
CAATGAGAGAAAAGTCCATCTGCAAAATGATCACACCATGTTTGCTTTCA
ATCATTTTGTACTTTTATAATTTTGATATTTAATATAATTACATTGCTCC
TCCTCCTCCTCCTCCTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTC
TTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTTCTT
CAAAATTGTCCCATATTCTCCTCCTTGTCTTCTAACTCAGGTATTCTTTT
TTCCTTACTATTATTGCATAAATATATCTATACCTACATACCTATATATC
TATCCCTAATTACAACCTGTTTAGTCCTTTCATCACTGATTTTTCTTACC
CGTACTTACCCACCCTCTGTACTGCGTCGCTTTAATATTACTCCTTACTC
CCTCCTCTTAATTTACCGACCCATTTACCATTTCGTTACTTCTGTCCCTC
TCCTATTACTTTCTTCTCCGCCCCACTATCTATACTCAACTACACACAAT
AAACACGAATTACATAATATTTGCATCCCCCCTCTTCCCCTCATCCCTAC
TCTTCTATCACCAACTCATTTATTCACTCTTACTCCAACCTTCATCTCAT
CCATCTAATCGTGCCTCCCCTAC

TTTTTTTTTACCATGGAGCCXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXCCCATTCAACAGAAAGCCTGCAAGATGAC
AATTATATCTTCTGCCTGAAAGTTATCTTTATAATCTTACTATGCTTTAT
TTTTATAGTAGAATTTACTGTCTATAATACATATTATGAGTTTAGAAATA
CTGTTTAGCTTTGCTACTAGGAAATATTTTATAGACAGATAGTTTTATTT
AGTCATAATTTTGTTTGTTTGTATGTTTGTTTTTTACAACTTAGAAGATT
GCCTAGTAAATTTTCATATGGTTGTGCACATAAATAGCTGGATGGACCTG
TAATTGGTATGATTAAAAGAAAAATAGCATATGCATACTTTTAAAAATAG
GTATTTTAAATATTGGTGTGTTTTTAATTACTTGTAGATTGTAAAGGTCC
TCCTCCAAGAGAAAATTCAGAAATTCTCTCAGGCTCGTGGTCAGAACAAC
TATATCCAGAAGGCACCCAGGTTACCTACAAATGCCGCCCTGGATACCGA
ACACTTGGCACTATTGTAAAAGTATGCAAGAATGGAAAATGGGTGGCGTC
TAACCCATCCAGGATATGTCGGAGTAAGTACTTCAAGTTTGTAAAACTTA
AGAAAATTTTTAGTTTTGAATGTATAAAATTATTACAGTATATTTACAAA
CTGTATTACTGCTATAGCTAAAATATAAAGAAAGCATTTTAAAATGTAGT
TATCCTACAAAACTAAAAAATGGAAGCATGCAGTTATCTTAAATTATAAA
ATATTCTTTGTTATTTTCAGTTTTTCTTCTACTCAATGACATCAAAAATG
TGCTTTCGTGACTCCTACATAAGGTGTATTTCATGGACCATACCCTAATA
TTGCATCTTCTTTTCATTTTAGAAAAGCCTTGGGGGCATTCCCGGAAAAA
CACCCCTTTGGGCCCTTTTAGCTGGGCAGCTGGGATTTCCCATTTTAAGT
TTGTGGCCAAGGGTGGTTTTTATCCTCTGATAGAAGGGGAAAAGTTTTTT
AACATTATTAAGGGCTTATTCTCCCAAACCCCGAAGAGAGAACCCCCTCC
AATCTTTTTTTTTTTATCAAAAACAAAAATGTTTCTTTTTATACCTTTTT
CATTTACACGCTTCCAATCAAACTTTTTTCTCCCTTTAAGGTTTTTTTTT
TGTTAATAACAGGGGGGCCTCCCCCCCCATTACTTAAAGAGAAGCCATCT
ATACCTTCTTTTCTTCTTCTCCGGN

Query= MSMg01no106_a23.g1 MSMg01no106_a23.g1 CHROMAT_FILE:
MSMg01no106_a23.g1 PHD_FILE: MSMg01no106_a23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:05:57 2005
         (737 letters)



>mm_chr1_142059081_142060218
          Length = 1138

 Score = 1381 bits (714), Expect = 0.0
 Identities = 732/738 (99%), Gaps = 1/738 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   cagaaagcctgcaagatgacaattatatcttctgcctgaaagttatctttataatcttac 60
           ||||||||||||||||||||||||||||||||||  ||||||||||||||||||||||||
Sbjct: 991 cagaaagcctgcaagatgacaattatatcttctgaatgaaagttatctttataatcttac 932

                                                                       
Query: 61  tatgcttta-tttttatagtagaatttactgtctataatacatattatgagtttagaaat 119
           ||||||||| |||||||||||||||||||||| |||||||||||||||||||||||||||
Sbjct: 931 tatgctttattttttatagtagaatttactgtatataatacatattatgagtttagaaat 872

                                                                       
Query: 120 actgtttagctttgctactaggaaatattttatagacagatagttttatttagtcataat 179
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 871 actgtttagctttgctactaggaaatattttatagacagatagttttatttagtcataat 812

                                                                       
Query: 180 tttgtttgtttgtatgtttgttttttacaacttagaagattgcctagtaaattttcatat 239
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 811 tttgtttgtttgtatgtttgttttttacaacttagaagattgcctagtaaattttcatat 752

                                                                       
Query: 240 ggttgtgcacataaatagctggatggacctgtaattggtatgattaaaagaaaaatagca 299
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 751 ggttgtgcacataaatagctggatggacctgtaattggtatgattaaaagaaaaatagca 692

                                                                       
Query: 300 tatgcatacttttaaaaataggtattttaaatattggtgtgtttttaattacttgtagat 359
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 691 tatgcatacttttaaaaataggtattttaaatattggtgtgtttttaattacttgtagat 632

                                                                       
Query: 360 tgtaaaggtcctcctccaagagaaaattcagaaattctctcaggctcgtggtcagaacaa 419
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 631 tgtaaaggtcctcctccaagagaaaattcagaaattctctcaggctcgtggtcagaacaa 572

                                                                       
Query: 420 ctatatccagaaggcacccaggttacctacaaatgccgccctggataccgaacacttggc 479
           |||||||||||||||||||||| |||||||||||||||||||||||||||||||||||||
Sbjct: 571 ctatatccagaaggcacccaggctacctacaaatgccgccctggataccgaacacttggc 512

                                                                       
Query: 480 actattgtaaaagtatgcaagaatggaaaatgggtggcgtctaacccatccaggatatgt 539
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 511 actattgtaaaagtatgcaagaatggaaaatgggtggcgtctaacccatccaggatatgt 452

                                                                       
Query: 540 cggagtaagtacttcaagtttgtaaaacttaagaaaatttttagttttgaatgtataaaa 599
           |||||||||||||||||||||||||||||||||||||||||||||||||||||| |||||
Sbjct: 451 cggagtaagtacttcaagtttgtaaaacttaagaaaatttttagttttgaatgtgtaaaa 392

                                                                       
Query: 600 ttattacagtatatttacaaactgtattactgctatagctaaaatataaagaaagcattt 659
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 391 ttattacagtatatttacaaactgtattactgctatagctaaaatataaagaaagcattt 332

                                                                       
Query: 660 taaaatgtagttatcctacaaaactaaaaaatggaagcatgcagttatcttaaattataa 719
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 331 taaaatgtagttatcctacaaaactaaaaaatggaagcatgcagttatcttaaattataa 272

                             
Query: 720 aatattctttgttatttt 737
           ||||||||||||||||||
Sbjct: 271 aatattctttgttatttt 254


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 36
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 737
Length of database: 1138
Length adjustment: 10
Effective length of query: 727
Effective length of database: 1128
Effective search space:   820056
Effective search space used:   820056
X1: 9 (17.8 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 9 (18.3 bits)
S2: 9 (18.1 bits)