Query= MSMg01no106_f04.b1 MSMg01no106_f04.b1 CHROMAT_FILE:
MSMg01no106_f04.b1 PHD_FILE: MSMg01no106_f04.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:06:35 2005
(152 letters)
>mm_chr1_37384167_37384718
Length = 552
Score = 279 bits (144), Expect = 7e-80
Identities = 150/152 (98%)
Strand = Plus / Plus
Query: 1 ctgctgctgctgcatcgctactgtcccacagtggccccagtcttctgctctgtggcctct 60
|||||||||||||||||||||||||||||||||||||||||||||||||||||||| |||
Sbjct: 201 ctgctgctgctgcatcgctactgtcccacagtggccccagtcttctgctctgtggcttct 260
Query: 61 ttctcactgtgatggcctcttacagaacactcatcaaacctatcatgcattgtcagccct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ttctcactgtgatggcctcttacagaacactcatcaaacctatcatgcattgtcagccct 320
Query: 121 ccccccgccccccatatcccccgtgaatggtt 152
|||||||||||||| |||||||||||||||||
Sbjct: 321 ccccccgccccccacatcccccgtgaatggtt 352
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 152
Length of database: 552
Length adjustment: 8
Effective length of query: 144
Effective length of database: 544
Effective search space: 78336
Effective search space used: 78336
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no106_f04.g1 MSMg01no106_f04.g1 CHROMAT_FILE:
MSMg01no106_f04.g1 PHD_FILE: MSMg01no106_f04.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:06:35 2005
(221 letters)
>mm_chr1_37530913_37531536
Length = 624
Score = 387 bits (200), Expect = e-112
Identities = 214/220 (97%), Gaps = 3/220 (1%)
Strand = Plus / Minus
Query: 5 aagcagctagagagaagggaaatgtccagttgaccattctgagacactagaccgtagact 64
|||||||||||||||||||||||||||||||||||||||||||||||||| |||||||||
Sbjct: 424 aagcagctagagagaagggaaatgtccagttgaccattctgagacactaggccgtagact 365
Query: 65 ctgcagggtaaggctgttgtccaagagacagaaataaatgccgtgagccctggcttctac 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 364 ctgcagggtaaggctgttgtccaagagacagaaataaatgccgtgagccctggcttctac 305
Query: 125 ctgataacaacattctgcgtcagtacagaaggaagaataccaactgagctgctggaaaaa 184
||| |||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 304 ctggtaacaacattctgcgtcagtacagaaggaagaataccaaccgagctgctggaaaaa 245
Query: 185 tctcagac---gagggttctgaaaggaggaagttatgcag 221
|||||||| |||||||||||||||||||||||||||||
Sbjct: 244 tctcagactctgagggttctgaaaggaggaagttatgcag 205
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 221
Length of database: 624
Length adjustment: 9
Effective length of query: 212
Effective length of database: 615
Effective search space: 130380
Effective search space used: 130380
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
