Query= MSMg01no108_b24.b1 MSMg01no108_b24.b1 CHROMAT_FILE:
MSMg01no108_b24.b1 PHD_FILE: MSMg01no108_b24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:10:52 2005
(274 letters)
>mm_chr1_182862548_182863221
Length = 674
Score = 445 bits (230), Expect = e-129
Identities = 268/296 (90%), Gaps = 26/296 (8%)
Strand = Plus / Minus
Query: 1 gagaggtgaaatttctaagatgtaacttgactctctttcttt------------------ 42
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Sbjct: 536 gagaggtgaaatttctaagatgtaacttgactctctttctttctctttttcttttctttt 477
Query: 43 ------ttttcttttcttttcttttctttttaactctcttaaaaataattagaattcagg 96
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Sbjct: 476 cttttcttttcttttcttttcttttctttttaactctcttaaaaataattagaattcagg 417
Query: 97 agcattcagatctgtggaaggaaggagtgtgggaagagacaggctcttcctttgctcctc 156
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Sbjct: 416 aacattcagatctgtggaaggaaggagtgtgggaagagacaggctcttcctttgctcctc 357
Query: 157 ctgcgcaccgttctctgcctctcttgcagacaacatggaatggtttcctcgtcaggcaga 216
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 356 ctgcgcaccattctctgcctctcttgcagacaacatggaatggtttcctcgtcaggcaga 297
Query: 217 ttttattaacaaccgttatttgcacctatgtttttttt-aatttt-aatttaattt 270
|||||||||||||||||||||||||||||||||||||| |||||| ||||||||||
Sbjct: 296 ttttattaacaaccgttatttgcacctatgtttttttttaatttttaatttaattt 241
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 274
Length of database: 674
Length adjustment: 9
Effective length of query: 265
Effective length of database: 665
Effective search space: 176225
Effective search space used: 176225
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no108_b24.g1 MSMg01no108_b24.g1 CHROMAT_FILE:
MSMg01no108_b24.g1 PHD_FILE: MSMg01no108_b24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:10:52 2005
(197 letters)
>mm_chr1_182799400_182799996
Length = 597
Score = 381 bits (197), Expect = e-110
Identities = 197/197 (100%)
Strand = Plus / Plus
Query: 1 tgcctgaagaatttctgttgtcacagcaagtggctgaacctaatggccaggttagcagag 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 tgcctgaagaatttctgttgtcacagcaagtggctgaacctaatggccaggttagcagag 260
Query: 61 ctgtgccctgtcttgggagtatgagcagcccttggtcagctcctcacaggcaagtggacc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 ctgtgccctgtcttgggagtatgagcagcccttggtcagctcctcacaggcaagtggacc 320
Query: 121 ttttactggtgatgtaagatcatcgttgtgattggccttgcagcaaggaaggcttggctt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttttactggtgatgtaagatcatcgttgtgattggccttgcagcaaggaaggcttggctt 380
Query: 181 gtttgtggttcttgtat 197
|||||||||||||||||
Sbjct: 381 gtttgtggttcttgtat 397
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 197
Length of database: 597
Length adjustment: 8
Effective length of query: 189
Effective length of database: 589
Effective search space: 111321
Effective search space used: 111321
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
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