Query= MSMg01no109_l15.b1 MSMg01no109_l15.b1 CHROMAT_FILE:
MSMg01no109_l15.b1 PHD_FILE: MSMg01no109_l15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:13:03 2005
(261 letters)
>mm_chr1_49145174_49145835
Length = 662
Score = 464 bits (240), Expect = e-135
Identities = 255/260 (98%), Gaps = 3/260 (1%)
Strand = Plus / Minus
Query: 3 gaattcctgaactt-ttcat-aaatccctgtctgtatagttatgatgaggttcatgtcat 60
|||||||||||||| || || |||||||||||||||||||||||||||||||||||||||
Sbjct: 310 gaattcctgaacttctt-ataaaatccctgtctgtatagttatgatgaggttcatgtcat 252
Query: 61 ttttcgctagtgtatagtttgctgttaatagttttacaatcattatgctttcctattagt 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 251 ttttcgctagtgtatagtttgctgttaatagttttacaatcattatgctttcctattagt 192
Query: 121 ttttttgttagaggtggtattatgattttgtgattctcttctcagtttattctacaaagg 180
||| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 191 tttcttgttagaggtggtattatgattttgtgattctcttctcagtttattctacaaagg 132
Query: 181 ataatgttttgtgttttcttgggtacataccccacttgtgttggagttttctttgtacta 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 131 ataatgttttgtgttttcttgggtacataccccacttgtgttggagttttctttgtacta 72
Query: 241 tcctctacagtgctgatttg 260
||||||| ||||||||||||
Sbjct: 71 tcctctagagtgctgatttg 52
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 10
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 261
Length of database: 662
Length adjustment: 9
Effective length of query: 252
Effective length of database: 653
Effective search space: 164556
Effective search space used: 164556
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no109_l15.g1 MSMg01no109_l15.g1 CHROMAT_FILE:
MSMg01no109_l15.g1 PHD_FILE: MSMg01no109_l15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:13:03 2005
(163 letters)
>mm_chr1_48998002_48998567
Length = 566
Score = 298 bits (154), Expect = 1e-85
Identities = 162/166 (97%), Gaps = 3/166 (1%)
Strand = Plus / Plus
Query: 1 aaacctacagctagaaaaaattgggcaacctatatcaaatatgaagaacataaaaagaca 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 201 aaacctacagctagaaaaaattgggcaacctatatcaaatatgaagaacataaaaagaca 260
Query: 61 tattaataaactttgttttgaataaaattagtaaatctgaatattaaaataaattgttt- 119
|| ||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tagtaataaactttgttttgaataaaattagtaaatctgaatattaaaataaattgtttc 320
Query: 120 --atttaactatgagattcactctataattaattgaatatatttaa 163
||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 ttatttaactatgagattcactctataattaattgaatatatttaa 366
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 7
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 163
Length of database: 566
Length adjustment: 8
Effective length of query: 155
Effective length of database: 558
Effective search space: 86490
Effective search space used: 86490
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
