Query= MSMg01no110_p17.b1 MSMg01no110_p17.b1 CHROMAT_FILE:
MSMg01no110_p17.b1 PHD_FILE: MSMg01no110_p17.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:14:44 2005
(650 letters)
>mm_chr1_171505659_171506708
Length = 1050
Score = 1208 bits (625), Expect = 0.0
Identities = 636/641 (99%), Gaps = 5/641 (0%)
Strand = Plus / Plus
Query: 13 tcttttattgc--agaactatgctgagggtacaa-tgatgggactgaagacatggttcag 69
||||||| || ||||||||||||||||||||| |||||||||||||||||||||||||
Sbjct: 212 tctttta--gctgagaactatgctgagggtacaaatgatgggactgaagacatggttcag 269
Query: 70 tgctgctgtggcttgctccagttcaggagaccctgcattctcttttctcaacatggagaa 129
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 270 tgctgctgtggcttgctccagttcaggagaccctgcattctcttttctcaacatggagaa 329
Query: 130 taggcagcaaataggcctgagagagtcagaggaagcaactccaagtatagcctttttacc 189
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 330 taggcagcaaataggcctgagagagtcagaggaagcaactccaagtatagcctttttacc 389
Query: 190 tccactaagtcccaagttgttatttagtaattctttagagcttaattatacagattccct 249
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 390 tccactaagtcccaagttgttatttagtaattctttagagcttaattatacagattccct 449
Query: 250 atttaattgattagcttgagtataggttccttttcagttcaatttgacagacttctcttt 309
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 450 atttaattgattagcttgagtataggttccttttcagttcaatttgacagacttctcttt 509
Query: 310 ttcagagagggtttcactatttacccactggctaacctggaacatactatgcgctgagac 369
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 510 ttcagagagggtttcactatttacccactggctaacctggaacatactatgcgctgagac 569
Query: 370 taaaggtgtatacaatcatgtccatccaatatgaaagatttcatataatatcattacata 429
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 570 taaaggtgtatacaatcatgtccatccaatatgaaagatttcatataatatcattacata 629
Query: 430 aatttgtattaattccattcattaagggaccaaaacaattgttccagggaagtagagatt 489
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 630 aatttgtattaattccattcattaagggaccaaaacaattgttccagggaagtagagatt 689
Query: 490 caagtcaatttcatatacatgaagaaaagtaattggattatcttaaaattatactcaaaa 549
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 690 caagtcaatttcatatacatgaagaaaagtaattggattatcttaaaattatactcaaaa 749
Query: 550 caaaagtgaaacagagattagtggtagatcagaaaagtatcaggctcctttctgtcttgt 609
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 750 caaaagtgaaacagagattagtggtagatcagaaaagtatcaggctcctttctgtcttgt 809
Query: 610 tagtaatgattgggattgcaggggtttgaaatttttagtct 650
|||||||||||||||||||||||||||||||||||||||||
Sbjct: 810 tagtaatgattgggattgcaggggtttgaaatttttagtct 850
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 32
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 650
Length of database: 1050
Length adjustment: 10
Effective length of query: 640
Effective length of database: 1040
Effective search space: 665600
Effective search space used: 665600
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no110_p17.g1 MSMg01no110_p17.g1 CHROMAT_FILE:
MSMg01no110_p17.g1 PHD_FILE: MSMg01no110_p17.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:14:44 2005
(623 letters)
>mm_chr1_171636050_171637072
Length = 1023
Score = 752 bits (389), Expect = 0.0
Identities = 389/389 (100%)
Strand = Plus / Minus
Query: 235 ggagttaagagcagcccagaaggaacatagcaaattataaatcagggttattgataggga 294
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 1023 ggagttaagagcagcccagaaggaacatagcaaattataaatcagggttattgataggga 964
Query: 295 agtagccataatgacatatctgcccaactctagtgctttaaaggcctattgtaaatatca 354
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 963 agtagccataatgacatatctgcccaactctagtgctttaaaggcctattgtaaatatca 904
Query: 355 cagtttatgtcttttatctgggaacagaatggccaaaggcaaggtagaaaccctgattga 414
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 903 cagtttatgtcttttatctgggaacagaatggccaaaggcaaggtagaaaccctgattga 844
Query: 415 gattagttattattataacagacacttgctgtccagtgtacaacttgaactcagttcctg 474
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 843 gattagttattattataacagacacttgctgtccagtgtacaacttgaactcagttcctg 784
Query: 475 atacccacataatggaaggagaaagcagactccagaaagttgttacaggatcaccactac 534
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 783 atacccacataatggaaggagaaagcagactccagaaagttgttacaggatcaccactac 724
Query: 535 ataggcaccatggtatatgtgcacaagcttgtgcacacatgtatgtatgtgtgtgtaggt 594
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 ataggcaccatggtatatgtgcacaagcttgtgcacacatgtatgtatgtgtgtgtaggt 664
Query: 595 gagctctgtatgcatgtgtgtgcgcacac 623
|||||||||||||||||||||||||||||
Sbjct: 663 gagctctgtatgcatgtgtgtgcgcacac 635
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 623
Length of database: 1023
Length adjustment: 10
Effective length of query: 613
Effective length of database: 1013
Effective search space: 620969
Effective search space used: 620969
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
