Query= MSMg01no111_h24.b1 MSMg01no111_h24.b1 CHROMAT_FILE:
MSMg01no111_h24.b1 PHD_FILE: MSMg01no111_h24.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:15:54 2005
(665 letters)
>mm_chr1_125394925_125395989
Length = 1065
Score = 601 bits (311), Expect = e-176
Identities = 339/349 (97%), Gaps = 3/349 (0%)
Strand = Plus / Minus
Query: 5 gaattctaaaaattatttaatctctttatttctgtttttatccagtagtcaatttgaatt 64
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 350 gaattctaaaaattatttaatttctttatttctgtttttatccagtagtcaatttgaatt 291
Query: 65 ttttctattgtttctggtgttgataacctgcttaagttcatccctatctcatagaatgcc 124
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||
Sbjct: 290 ttttctattgtttctggtgttgataacctgcttaaattcatccctatctcatagaatgcc 231
Query: 125 agagttatatattttttcctttttatttatttttattttttggtaactattgataattat 184
|||||||||||||||||||||||||||||||||| ||||||||||| ||||||||||||
Sbjct: 230 tgagttatatattttttcctttttatttatttttactttttggtaaccattgataattat 171
Query: 185 tttgtgtctagtatgtggtttattgtggag-aagtgccatgaggtatcaagtag--atat 241
|||||||||||||||||||||||||||||| ||||||||||||||||||||||| ||||
Sbjct: 170 tttgtgtctagtatgtggtttattgtggagtaagtgccatgaggtatcaagtagctatat 111
Query: 242 atttttttaaaatattggatagactgttaagtatatatctgttacgtagttttaatttaa 301
|||||||||||||||||||||||||||||||||||||||||||| |||||||||||||||
Sbjct: 110 atttttttaaaatattggatagactgttaagtatatatctgttaggtagttttaatttaa 51
Query: 302 tttaagttgtagtaatgtttcttttaaagtgtgggtgcttttgtgtttg 350
||||||||||||||||||||||||||||| |||||||||||||||||||
Sbjct: 50 tttaagttgtagtaatgtttcttttaaagagtgggtgcttttgtgtttg 2
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 18
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 665
Length of database: 1065
Length adjustment: 10
Effective length of query: 655
Effective length of database: 1055
Effective search space: 691025
Effective search space used: 691025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no111_h24.g1 MSMg01no111_h24.g1 CHROMAT_FILE:
MSMg01no111_h24.g1 PHD_FILE: MSMg01no111_h24.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:15:55 2005
(583 letters)
>mm_chr1_125305353_125306334
Length = 982
Score = 944 bits (488), Expect = 0.0
Identities = 543/578 (93%), Gaps = 27/578 (4%)
Strand = Plus / Plus
Query: 3 attccctgaagtttgagttatgggtggttaccaacagcccgatgtgggtgctggcaacag 62
|||||||| |||||||||||| ||||||||||||||||| ||||||||||||||||||||
Sbjct: 203 attccctggagtttgagttataggtggttaccaacagcctgatgtgggtgctggcaacag 262
Query: 63 aactgggatcctctgcaaaagcagcaagcacccgaaaaccctgatccatctctctagctc 122
|| |||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 263 aaatgggatcctctgcaaaagcagcaagcacccgaaaaccctgatccatctctctagctc 322
Query: 123 ttctttgctctatttgaggctggtgaacagtctttcagcattgggctggaagatagcttg 182
||||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||
Sbjct: 323 ttctttgctctatttgaggctggtgaacaatctttcagcattgggctggaagatagcttg 382
Query: 183 gccattaaaggctaaggttcataatcctgaagacaaaaggattatacactttgctgtttc 242
|||||||||||||||||||||||||||||||||||||||||||||||| ||||||||| |
Sbjct: 383 gccattaaaggctaaggttcataatcctgaagacaaaaggattatacattttgctgtt-c 441
Query: 243 aatgacatattttcaaactatctattatttcatgtcctcttgttaaaatattttgtaact 302
|||||||||||||||||||||||||||||||||||||||||| |||||||||||||||||
Sbjct: 442 aatgacatattttcaaactatctattatttcatgtcctcttgataaaatattttgtaact 501
Query: 303 ttactggtatttaggctacgatagcatatagatagatagatagatagatagatagataga 362
||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ttactggtatttaggctactatagcatatagatagatagatagatagatagatagataga 561
Query: 363 tagatagatagatagatagatagatagatagatagagatataaccaaaggcattaattag 422
|||| ||||||||||||||||||||||||||||||
Sbjct: 562 taga--------------------------gatagagatataaccaaaggcattaattag 595
Query: 423 aattgtatatatttctttccctgtgattccagcttgttatgaatttcaaagcattatttt 482
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 596 aattgtatatatttctttccctgtgattccagcttgttatgaatttcaaagcattatttt 655
Query: 483 tagatgtacaaatatttaaatgatcagatattcctgagtagtcaacagtttataacaaaa 542
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 656 tagatgtacaaatatttaaatgatcagatattcctgagtagtcaacagtttataacaaaa 715
Query: 543 ggactattaatcactggcttaattacattgctctagtt 580
||||||||||||||||||||||||||||||||||||||
Sbjct: 716 ggactattaatcactggcttaattacattgctctagtt 753
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 38
Number of extensions: 15
Number of successful extensions: 15
Number of sequences better than 10.0: 1
Number of HSP's gapped: 9
Number of HSP's successfully gapped: 1
Length of query: 583
Length of database: 982
Length adjustment: 10
Effective length of query: 573
Effective length of database: 972
Effective search space: 556956
Effective search space used: 556956
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
