CTATXXXXXXXXXXXXXXXXXXXXXXXXXXXXXTTCCAGAGGATCCGCGG
AATTCCTGATCTTTCCAAGGCTTTTATCATGAATGAGTGTTGGATTTTTT
GAAATGTTTTCTCTGCATCTAACGAGATGATCATGTGGTTTTTGTTTTTG
AGTTTGTTTATATACTGGATTATATTGACGGATTTCCATATATTAAACCA
TCCCTGCATCCCTGGAATAAAACCTACTTGGTCAGGATGGATGATTGTTT
TAATGTGTTCTTGGATTCGGTTAGCGAGAATTTTATTGACTATTTTTGCA
TTGATATTCATAAGGGAAATTGGTCTAAAGTTCTCTATCTTTGTTGGATC
TTTCTGTGGTTTAGGTATCAGAGTAATTGTGGCTTCATAGAATGAGTTGG
GTAGAGTACCTTCTGCTTCTATTTTGTGGAATAGTTTGTGCAGAACTGGA
ATTAGACTTCTTTGAAGGTCTGGTAGAACTCTGCACTAAACCCATCTGGT
CTTGAGTTTTGCTTTTGTTTTTGTTTTTGCTTTTGTTTTTGTTTCTGTCT
CGCCCGTCACACTATTATTGCCTTTCTTCCACTCTCTTTATTCCATATTC
CCCCCTCTCCCATCTCCAACTTGCTTCCCATCCCACTCCCTCTCTTGTTT
ATTTTTATCTTTCCTTCGTTCTTTCTTCACCATCTTTTTTCAGTTTCCGT
TTTCCCTTTCTCCTTTTCN

CAATACXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXXXXXXTTGTTTACTGAGTTGGTTAACACATGG
AGCAATGAACTTGATTAAAATAAAAGCAGACATTTGCACTATGCCTGGGA
ACTGAATATCTGCCCATCACCACAAAAGAAACCTGTTCATCAGGACTGAT
TTCCTGGCACTGTGTGCATTTTCCTAGAGAGACACGGGAATATCTTTGTT
CTTTCTAATTTTCTCCTTTGTTATTTTTTAATACGGTGAATGATATTCAC
CAATGGTTGCTCCTCTTTCTAGCTTCCATTTGATGCTTTCGGTCATAGTG
TTGGGCTCCCTGGTTATTATTATCTTTTCCCTCTCTCTCTCTCTTCTTTT
TTTTTTTTTTATTTTTAAGCCCTCACTTTGTCACCTACCTAGTCTCCAAG
AAAACAAATCTCCCCTAGAATCCGGAGCTCACTCCATTTCTAGCCGAGGA
GTGCTCTGTCTAGGATTCTTGGTCACATTCAGAGACTCAAATCCCATCCT
GTATCACAGAAAAAATCAGCCAGCCCTGCAGTGCCCACCCACTCCCTATC
TATTCCAACACCAACTTCAAGAACCTGTAGAAATGCCACTTTTCCTTTCA
GACATTTTGTCTCTGACAACTTAGTGTTCCAAGAGCTACTTCTCAGAAGC
ACAGCTG

Query= MSMg01no112_g10.g1 MSMg01no112_g10.g1 CHROMAT_FILE:
MSMg01no112_g10.g1 PHD_FILE: MSMg01no112_g10.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:17:33 2005
         (597 letters)



>mm_chr1_179879826_179880822
          Length = 997

 Score =  882 bits (456), Expect = 0.0
 Identities = 485/498 (97%), Gaps = 8/498 (1%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttgtttactgagttggttaacacatggagcaatgaacttgattaaaataaaagcagacat 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 490 ttgtttactgagttggttaacacatggagcaatgaacttgattaaaataaaagcagacat 431

                                                                       
Query: 61  ttgcactatgcctgggaactgaatatctgcccatcaccacaaaagaaacctgttcatcag 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 430 ttgcactatgcctgggaactgaatatctgcccatcaccacaaaagaaacctgttcatcag 371

                                                                       
Query: 121 gactgatttcctggcactgtgtgcattttcctagagagacacgggaatatctttgttctt 180
           |||||||||| |||||||||||||||||||||||||| ||| || |||||||||||||||
Sbjct: 370 gactgatttcttggcactgtgtgcattttcctagagaaacatggaaatatctttgttctt 311

                                                                       
Query: 181 tctaattttctcctttgttattttttaatacggtgaatgatattcaccaatggttgctcc 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 310 tctaattttctcctttgttattttttaatacggtgaatgatattcaccaatggttgctcc 251

                                                                       
Query: 241 tctttctagcttccatttgatgctttcggtcatagtgttgggctccctggttattattat 300
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 250 tctttctagcttccatttgatgctttcggtcatagtgttgggctccctggttattattat 191

                                                                       
Query: 301 cttttccctctctctctctcttcttttttttttttttatttttaagccctcactttgtca 360
           |||||||      ||||||||||||||||||||||||| |||||||||||||||||||||
Sbjct: 190 cttttcc------ctctctcttctttttttttttttta-ttttaagccctcactttgtca 138

                                                                       
Query: 361 cctacctagtctccaagaaaacaaatctcccctagaatccggagctcactccatttctag 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 137 cctacctagtctccaagaaaacaaatctcccctagaatccggagctcactccatttctag 78

                                                                       
Query: 421 ccgaggagtgctctgtctaggattcttggtcacattcagagactcaaatcccatcctgta 480
           ||||||||||||||||||||||||||||||||| ||||||||||||||||||||||||||
Sbjct: 77  ccgaggagtgctctgtctaggattcttggtcactttcagagactcaaatcccatcctgta 18

                             
Query: 481 tcacagaaaaaatcagcc 498
           ||| ||||||||||||||
Sbjct: 17  tca-agaaaaaatcagcc 1


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 21
Number of extensions: 3
Number of successful extensions: 3
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 597
Length of database: 997
Length adjustment: 10
Effective length of query: 587
Effective length of database: 987
Effective search space:   579369
Effective search space used:   579369
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)