Query= MSMg01no114_a15.b1 MSMg01no114_a15.b1 CHROMAT_FILE:
MSMg01no114_a15.b1 PHD_FILE: MSMg01no114_a15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:19:38 2005
(387 letters)
>mm_chr1_76744291_76745076
Length = 786
Score = 710 bits (367), Expect = 0.0
Identities = 379/383 (98%), Gaps = 1/383 (0%)
Strand = Plus / Plus
Query: 5 gaattctcctaagtgtgcttaaatctctactatgtttgaaattatacctataatggtttt 64
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 205 gaattctcctaagtgtgtttaaatctctactatgtttgaaattatacctataatggtttt 264
Query: 65 attcaccatttttcttctttcttatactattctcagaagtgtttgtttatgttaaatgat 124
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 265 attcaccatttttcttctttcttatactattctcagaagtgtttgtttatgttaaatgat 324
Query: 125 aacttctgttgctcattttgtggttgctttctaaaaatcattttctttttatttatctaa 184
|||||||||||||||||||||||||||||||||||| |||||||||||||||||||||||
Sbjct: 325 aacttctgttgctcattttgtggttgctttctaaaa-tcattttctttttatttatctaa 383
Query: 185 tttctagctgtgcatttttctttgtagctactatggctgtagattattcagtgatttgca 244
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 384 tttctagctgtgcatttttctttgtagctactatggctgtagattattcagtgatttgca 443
Query: 245 tgactttactaagaagggaaatgactttaatattaataagtatcttcctctttctatgct 304
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||| |
Sbjct: 444 tgactttactaagaagggaaatgactttaatattaataagtatcttcctctttctatgtt 503
Query: 305 gtttccatgcccttttgcacttattccctaaatctttgggcacatcttttctgaaacaat 364
||||||||| ||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 504 gtttccatgtccttttgcacttattccctaaatctttgggcacatcttttctgaaacaat 563
Query: 365 ttatctctaggatccattctgga 387
|||||||||||||||||||||||
Sbjct: 564 ttatctctaggatccattctgga 586
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 387
Length of database: 786
Length adjustment: 9
Effective length of query: 378
Effective length of database: 777
Effective search space: 293706
Effective search space used: 293706
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no114_a15.g1 MSMg01no114_a15.g1 CHROMAT_FILE:
MSMg01no114_a15.g1 PHD_FILE: MSMg01no114_a15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:19:38 2005
(515 letters)
>mm_chr1_76876490_76877404
Length = 915
Score = 980 bits (507), Expect = 0.0
Identities = 513/515 (99%)
Strand = Plus / Minus
Query: 1 atacagacaaacaaaacccagatgtcacagggcagatgggtttacttactcctggttttc 60
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 715 atacagacaaacaaaacccagatgtcacagggcagatgggtttacttactcctggttttc 656
Query: 61 tgtgtcagattttcctgcttcgaggacatctttcaaatgtgactcttcagatccattgct 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 655 tgtgtcagattttcctgcttcgaggacatctttcaaatgtgactcttcagatccattgct 596
Query: 121 gagcttggcatctgcatgggatttcagccaggagacttgggtcctattttaggaatagag 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 595 gagcttggcatctgcatgggatttcagccaggagacttgggtcctattttaggaatagag 536
Query: 181 aaaaacatagggagttatatgagctcaggcacaatgagaacgacatctctagcatgtttt 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 535 aaaaacatagggagttatatgagctcaggcacaatgagaacgacatctctagcatgtttt 476
Query: 241 gaaggagtcccactgtgacattgcggatgatgggcactaggagatcctctggacctgtca 300
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 475 gaaggagtcccactgtgacattgcggatgatgggcactaggagatcctctggacctgtca 416
Query: 301 ttctctgaccccagcttttcttgaggcttatgcagcaagtatcacatggaagtgactctg 360
|||||||||||||||||| |||||||||||||||||||||||||||||||||||||||||
Sbjct: 415 ttctctgaccccagctttgcttgaggcttatgcagcaagtatcacatggaagtgactctg 356
Query: 361 agcaaaggaatttcaaagatttaaacctcagaaacagaacctggagggcagagcagattt 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 355 agcaaaggaatttcaaagatttaaacctcagaaacagaacctggagggcagagcagattt 296
Query: 421 gagagtcccaaactctttggaaaagggagctaggacctgtgcttcattgtttcaggagaa 480
||||||||||||||||| ||||||||||||||||||||||||||||||||||||||||||
Sbjct: 295 gagagtcccaaactcttcggaaaagggagctaggacctgtgcttcattgtttcaggagaa 236
Query: 481 agacaggcaatgagtaaggaaagaaaagaaggtgt 515
|||||||||||||||||||||||||||||||||||
Sbjct: 235 agacaggcaatgagtaaggaaagaaaagaaggtgt 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 26
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 515
Length of database: 915
Length adjustment: 10
Effective length of query: 505
Effective length of database: 905
Effective search space: 457025
Effective search space used: 457025
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
