Query= MSMg01no117_h15.b1 MSMg01no117_h15.b1 CHROMAT_FILE:
MSMg01no117_h15.b1 PHD_FILE: MSMg01no117_h15.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:03 2005
(189 letters)
>mm_chr1_140727424_140728015
Length = 592
Score = 348 bits (180), Expect = e-100
Identities = 188/192 (97%), Gaps = 3/192 (1%)
Strand = Plus / Minus
Query: 1 ggggaataaaatagcagcttggtgtgtagcatcta---cacttggctatgagtttacagt 57
||||||||||||||||||||||||||||||||||| ||||||||||||||||||||||
Sbjct: 392 ggggaataaaatagcagcttggtgtgtagcatctacaccacttggctatgagtttacagt 333
Query: 58 attgtcgcttttaaatgaacaaatttggtctgcaagatgtatttgaccttttttcgttaa 117
||||||||||||||||||||||||||||||||||||||||||||||||||||||| ||||
Sbjct: 332 attgtcgcttttaaatgaacaaatttggtctgcaagatgtatttgaccttttttctttaa 273
Query: 118 tcagtttttttttcagttggtaagggaagattttgaatcattctaataagtgcctcttaa 177
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 272 tcagtttttttttcagttggtaagggaagattttgaatcattctaataagtgcctcttaa 213
Query: 178 aattgtatgtta 189
||||||||||||
Sbjct: 212 aattgtatgtta 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 8
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 189
Length of database: 592
Length adjustment: 8
Effective length of query: 181
Effective length of database: 584
Effective search space: 105704
Effective search space used: 105704
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
| Query= MSMg01no117_h15.g1 MSMg01no117_h15.g1 CHROMAT_FILE:
MSMg01no117_h15.g1 PHD_FILE: MSMg01no117_h15.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:24:03 2005
(246 letters)
>mm_chr1_140599614_140600259
Length = 646
Score = 455 bits (235), Expect = e-132
Identities = 241/243 (99%)
Strand = Plus / Plus
Query: 1 tgtggctttgggctgtggtgagatccaagcccctgttgcttttggtgcagcttagatggc 60
||||||||||||||||||||||||||||||||||||||||||||||| ||||||||||||
Sbjct: 201 tgtggctttgggctgtggtgagatccaagcccctgttgcttttggtgtagcttagatggc 260
Query: 61 tttgcttccacccatccagcctcagcgttcagaagaataagaagctgaagattttagttc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 261 tttgcttccacccatccagcctcagcgttcagaagaataagaagctgaagattttagttc 320
Query: 121 tcaatgtgaaaaatgaaacttgcttttttttcttgcaggattctttaagatattttggat 180
|||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 321 tcaatgtgaaaaatgaaacttgcttttttttcttgcaggattctttaagatattttggaa 380
Query: 181 cctaaaggagaagcagagaagagccaaggataacaaaccattggtcaccgaggacattaa 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 381 cctaaaggagaagcagagaagagccaaggataacaaaccattggtcaccgaggacattaa 440
Query: 241 tta 243
|||
Sbjct: 441 tta 443
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 246
Length of database: 646
Length adjustment: 9
Effective length of query: 237
Effective length of database: 637
Effective search space: 150969
Effective search space used: 150969
X1: 7 (13.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 7 (14.4 bits)
S2: 7 (14.3 bits)
|
