CTCGGGGGAATCATAAXXXXXXXXXXXXXXXXXXXXXCTATTTTCAGAGA
ATGCGCGGAATTCTTTGTTTATCTCTGAGACCCATTTTTTAATGGGGTTA
TTTGATTTTCTGGAGTCCACCTTCTTGAGTTCTTTATATATATTAGATAT
TAGTCCTCTATCTGATTTAGGGTAGGTAAAGATACTTTCCCAATCTGTTG
GTGGCTTTTTTGTCTTCTTGACAGTGTCTTTTGTCTTACAGAAGCTTTGC
AGTTTCATGAGGTCCCATTTGTTGATTCTCGATCTTACAGCACAAGCCAA
TGCTGTTCTATTCAGGAATTTTTCCCCTGTGCCTATATCTTCGAGGCTTT
TCCCCACTTTCTCCTCTATAAGTTTCAGTGTCTCTGGTTTTATGTGGAGC
TCCTTGATGCACTTAGATTTGACCTTAGTACAAGGAGATAGGAATGGATC
AATTCACATTCTTCTACATGATAACCACCAGTTGAGCGAGCACCATTTGT
TGAAAATGCTGTCTTTTTTCCACTGGATAGTTTAGCTCCCTTGTCGAAGA
TCAAGTGACAATAGGTGTGTGGGTTCATTTCTGGGTCTTCAATTCTATTC
CATTGGTCTACTTGTCTGTCATTATACCAGTACCATGCAGTTTTTATCAC
AATTGCTCTATAGTTAAGCTTTAGGTCAGGCATGGTAATTCCACCAGAGG
TTCTTTTATCCTTGAGAAGAGTTTTTGCTATCCTATGN

AATGTGAXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXXX
XXXXXXXXXXXXXXXXXXTTCCTAAGTCAGCCTCCAGGATCAGAGTTTGA
GAAGGGTTTGCAAAATGGCATAAAGAGAACAAGTAGTGGCAATACTTTGG
AGGGATTGTTGTTCTGTTTAGCATTGTCAATGTTGGTGACTAGTTTAGTT
TAGTATTGAATTCAGATTCTGATAATTGAGCAAATTTAAACTCTAGTCAC
TCCTAAACTATATTTTCATTCCAAGTAACAAAACAAGTAGAGTTTCAAAG
CCTGCTTGACACAAGCTTAACAACACTAAATTTCCTATAACATAGAGTTA
GACATCATTAAGTTGGATGTCTGCAGAAAATCATAAGAAAACATTAAAAT
GTGACATGCCAGTGGTTCTTTTTCAAGTGTCTTTGTTGACTTATGTTTGT
TAGCTCTCTGTAGAGGCATCTCTTGTGTACCTGCTATGTGAAATCTATAG
CTTCAGACTACAAGGAGGGCAAAGCTATGATTATGACTGGGCAGACAAGC
TATTGCTCTTGATAAATCCTGGATGTATAACACCTTTAGATCATTGATTC
TCAATCTTCTTAATACTGCAAATCTATAATAAAGTTCCTCACATTGTGGT
AACCCCAACCATAAAATTATTTTTTGTTGCTGTTTTGCAAGTGTAGCTGT
GGTATTTTACTACTAATAATGCAN

Query= MSMg01no118_n23.g1 MSMg01no118_n23.g1 CHROMAT_FILE:
MSMg01no118_n23.g1 PHD_FILE: MSMg01no118_n23.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:25:51 2005
         (621 letters)



>mm_chr1_102464993_102466013
          Length = 1021

 Score = 1143 bits (591), Expect = 0.0
 Identities = 612/619 (98%), Gaps = 1/619 (0%)
 Strand = Plus / Minus

                                                                       
Query: 1   ttcctaagtcagcctccaggatcagagtttgagaagggtttgcaaaatggcataaagaga 60
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 723 ttcctaagtcagcctccaggatcagagtttgagaagggtttgcaaaatggcataaagaga 664

                                                                       
Query: 61  acaagtagtggcaatactttggagggattgttgttctgtttagcattgtcaatgttggtg 120
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 663 acaagtagtggcaatactttggagggattgttgttctgtttagcattgtcaatgttggtg 604

                                                                       
Query: 121 actagtttagtttagtattgaattcagattctgataattgagcaaatttaaactctagtc 180
           |||||||||||||||||||||||| ||||||||||| |||||||||||||||||||||||
Sbjct: 603 actagtttagtttagtattgaattaagattctgatagttgagcaaatttaaactctagtc 544

                                                                       
Query: 181 actcctaaactatattttcattccaagtaacaaaacaagtagagtttcaaagcctgcttg 240
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 543 actcctaaactatattttcattccaagtaacaaaacaagtagagtttcaaagcctgcttg 484

                                                                       
Query: 241 acacaagcttaacaacactaaatttcctataacatagagttagacatcattaagttggat 300
           |||||||||||||||||||| ||||||||||||||||||||||| |||||||||||||||
Sbjct: 483 acacaagcttaacaacactacatttcctataacatagagttagaaatcattaagttggat 424

                                                                       
Query: 301 gtctgcagaaaatcataagaaaacattaaaatgtgacatgccagtggttctttttcaagt 360
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 423 gtctgcagaaaatcataagaaaacattaaaatgtgacatgccagtggttctttttcaagt 364

                                                                       
Query: 361 gtctttgttgacttatgtttgttagctctctgtagaggcatctcttgtgtacctgctatg 420
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 363 gtctttgttgacttatgtttgttagctctctgtagaggcatctcttgtgtacctgctatg 304

                                                                       
Query: 421 tgaaatctatagcttcagactacaaggagggcaaagctatgattatgactgggcagacaa 480
           |||||||| |||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 303 tgaaatctgtagcttcagactacaaggagggcaaagctatgattatgactgggcagacaa 244

                                                                       
Query: 481 gctattgctcttgataaatcctggatgtataacacctttagatcattgattctcaatctt 540
           ||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 243 gctattgctcttgataaatcctggatgtataacacctttagatcattgattctcaatctt 184

                                                                       
Query: 541 cttaatactgcaaatctataataaagttcctcacattgtggtaaccccaaccataaaatt 600
           ||||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||
Sbjct: 183 cttaatactgcaaatctataatacagttcctcacattgtggtaaccccaaccataaaatt 124

                              
Query: 601 attttttgttgctgttttg 619
           | |||||||||||||||||
Sbjct: 123 a-tttttgttgctgttttg 106


Lambda     K      H
    1.37    0.711     1.31 

Gapped
Lambda     K      H
    1.34    0.600     1.10 


Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 33
Number of extensions: 1
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 621
Length of database: 1021
Length adjustment: 10
Effective length of query: 611
Effective length of database: 1011
Effective search space:   617721
Effective search space used:   617721
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)