Query= MSMg01no119_o19.b1 MSMg01no119_o19.b1 CHROMAT_FILE:
MSMg01no119_o19.b1 PHD_FILE: MSMg01no119_o19.b1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:27:12 2005
(332 letters)
>mm_chr1_189811762_189812493
Length = 732
Score = 542 bits (280), Expect = e-158
Identities = 319/332 (96%), Gaps = 2/332 (0%)
Strand = Plus / Plus
Query: 1 ccaaagtttggttccctcctctttttt-atattttcattattcaatctttaattttgcat 59
|||||||||| |||||| ||||||||| ||||||||||||||||||||||||||||||
Sbjct: 199 ccaaagtttgcttcccttctctttttttatattttcattattcaatctttaattttgcgc 258
Query: 60 gtgagtacatgattgccaccagacacgtgtggaggtcagaggatatcttgtgggagctgg 119
||||||||||||||||||||||||||||||||||||||||||||| |||||||||||||
Sbjct: 259 gtgagtacatgattgccaccagacacgtgtggaggtcagaggataagttgtgggagctgg 318
Query: 120 ttcccacattttagcatatgatccctgaggaattgaactcaggtgcttggttatgctttg 179
||||||||||||||||||||| ||||||||||||||||||||||||||||||||||||||
Sbjct: 319 ttcccacattttagcatatgaaccctgaggaattgaactcaggtgcttggttatgctttg 378
Query: 180 tggcaaggctcttt-cctgctgagatccacggctagcccttagtgtggttttctaggaaa 238
|||||||||||||| ||||||||||||||||||||||||||||||||| |||||||||||
Sbjct: 379 tggcaaggctcttttcctgctgagatccacggctagcccttagtgtggctttctaggaaa 438
Query: 239 acaacaacaaataatggctcttactactatgacgtgctcacatcaggactcaactctagg 298
||||||||||| |||||||||||||||||||||||| ||||||||||||| |||||||||
Sbjct: 439 acaacaacaaacaatggctcttactactatgacgtgttcacatcaggacttaactctagg 498
Query: 299 gatgaagcatgggatacaagaacaggactgca 330
||||||||||||||||||||||||||||||||
Sbjct: 499 gatgaagcatgggatacaagaacaggactgca 530
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 11
Number of extensions: 2
Number of successful extensions: 2
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 332
Length of database: 732
Length adjustment: 9
Effective length of query: 323
Effective length of database: 723
Effective search space: 233529
Effective search space used: 233529
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
| Query= MSMg01no119_o19.g1 MSMg01no119_o19.g1 CHROMAT_FILE:
MSMg01no119_o19.g1 PHD_FILE: MSMg01no119_o19.g1.phd.1 CHEM: term DYE:
big TIME: Tue May 17 18:27:12 2005
(422 letters)
>mm_chr1_189967078_189967899
Length = 822
Score = 785 bits (406), Expect = 0.0
Identities = 418/422 (99%)
Strand = Plus / Minus
Query: 1 ttttacgacttgtgatctttatttatatgacagtagggaaaacgactagatattgatact 60
|||||||||||||||||||||||||| |||||||||||||||||||||||||||||||||
Sbjct: 622 ttttacgacttgtgatctttatttatgtgacagtagggaaaacgactagatattgatact 563
Query: 61 cataaagcatgagattaataatcctatagtaaaacctgacagagattcaatatgcagagc 120
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 562 cataaagcatgagattaataatcctatagtaaaacctgacagagattcaatatgcagagc 503
Query: 121 ggtgctcctgccaagtttggataacaattaatagcaaaattttctgaagtcaatgtgttt 180
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 502 ggtgctcctgccaagtttggataacaattaatagcaaaattttctgaagtcaatgtgttt 443
Query: 181 tagaagatcataataatgtattcatgtgcaaattcatttccaatcaaaagcagccaaata 240
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 442 tagaagatcataataatgtattcatgtgcaaattcatttccaatcaaaagcagccaaata 383
Query: 241 ttaaaaattttcaaatatttcagaccacataaaatatacctactattgccttttaacttt 300
||||||||||||||||||||||||||| ||||||||||||||||||||||||||||||||
Sbjct: 382 ttaaaaattttcaaatatttcagaccaaataaaatatacctactattgccttttaacttt 323
Query: 301 gcttccaaacccggggtaatgtgccttttatgcacccctggagggacagcgcctgttatc 360
||||||||||| ||||||||||||||||||||||||||||||||||||| ||||||||||
Sbjct: 322 gcttccaaacctggggtaatgtgccttttatgcacccctggagggacagtgcctgttatc 263
Query: 361 ataatgattttctgtatctggctatactctcagtgaaagtttaaaggacaatctaactaa 420
||||||||||||||||||||||||||||||||||||||||||||||||||||||||||||
Sbjct: 262 ataatgattttctgtatctggctatactctcagtgaaagtttaaaggacaatctaactaa 203
Query: 421 ca 422
||
Sbjct: 202 ca 201
Lambda K H
1.37 0.711 1.31
Gapped
Lambda K H
1.34 0.600 1.10
Matrix: blastn matrix:1 -3
Gap Penalties: Existence: 2, Extension: 1
Number of Sequences: 1
Number of Hits to DB: 19
Number of extensions: 2
Number of successful extensions: 1
Number of sequences better than 10.0: 1
Number of HSP's gapped: 1
Number of HSP's successfully gapped: 1
Length of query: 422
Length of database: 822
Length adjustment: 9
Effective length of query: 413
Effective length of database: 813
Effective search space: 335769
Effective search space used: 335769
X1: 8 (15.9 bits)
X2: 517 (999.5 bits)
X3: 517 (999.5 bits)
S1: 8 (16.4 bits)
S2: 8 (16.2 bits)
|
